Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 AC004467.1-201ENST00000615678 330 ntBASIC6.61□□□□□ -1.35
TRIM41Q8WV44 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM41Q8WV44 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
TRIM41Q8WV44 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
TRIM41Q8WV44 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM41Q8WV44 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
TRIM41Q8WV44 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
TRIM41Q8WV44 RNU6-80P-201ENST00000384195 107 ntBASIC6.6□□□□□ -1.35
TRIM41Q8WV44 AL358075.3-201ENST00000426289 226 ntBASIC6.6□□□□□ -1.35
TRIM41Q8WV44 RPL31P61-201ENST00000496160 376 ntBASIC6.6□□□□□ -1.35
TRIM41Q8WV44 Y_RNA.686-201ENST00000516548 134 ntBASIC6.6□□□□□ -1.35
TRIM41Q8WV44 AL360157.1-201ENST00000565962 87 ntBASIC6.6□□□□□ -1.35
TRIM41Q8WV44 AC090616.3-201ENST00000582184 217 ntBASIC6.6□□□□□ -1.35
TRIM41Q8WV44 AC091932.3-201ENST00000624223 323 ntBASIC6.6□□□□□ -1.35
TRIM41Q8WV44 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC6.6□□□□□ -1.35
TRIM41Q8WV44 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TRIM41Q8WV44 AL049781.1-201ENST00000623195 3585 ntBASIC6.59□□□□□ -1.35
TRIM41Q8WV44 AL450326.2-201ENST00000421913 1962 ntBASIC6.59□□□□□ -1.35
TRIM41Q8WV44 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM41Q8WV44 RNU6-275P-201ENST00000364910 107 ntBASIC6.59□□□□□ -1.35
TRIM41Q8WV44 U1.1-201ENST00000384101 164 ntBASIC6.59□□□□□ -1.35
TRIM41Q8WV44 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM41Q8WV44 HMGB1P37-201ENST00000439613 609 ntBASIC6.59□□□□□ -1.35
TRIM41Q8WV44 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC6.59□□□□□ -1.35
TRIM41Q8WV44 AC018448.1-201ENST00000552843 316 ntBASIC6.59□□□□□ -1.35
TRIM41Q8WV44 TRAV28-201ENST00000557548 323 ntBASIC6.59□□□□□ -1.35
TRIM41Q8WV44 AC244505.7-201ENST00000599675 272 ntBASIC6.59□□□□□ -1.35
TRIM41Q8WV44 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC6.59□□□□□ -1.35
TRIM41Q8WV44 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM41Q8WV44 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM41Q8WV44 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM41Q8WV44 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TRIM41Q8WV44 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
TRIM41Q8WV44 AC058791.1-201ENST00000608412 3198 ntBASIC6.59□□□□□ -1.36
TRIM41Q8WV44 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM41Q8WV44 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
TRIM41Q8WV44 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM41Q8WV44 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM41Q8WV44 SNORA54-201ENST00000384281 123 ntBASIC6.58□□□□□ -1.36
TRIM41Q8WV44 MIR544A-201ENST00000384855 91 ntBASIC6.58□□□□□ -1.36
TRIM41Q8WV44 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM41Q8WV44 AC091179.1-201ENST00000461606 579 ntBASIC6.58□□□□□ -1.36
TRIM41Q8WV44 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC6.58□□□□□ -1.36
TRIM41Q8WV44 AC016256.1-201ENST00000547971 354 ntBASIC6.58□□□□□ -1.36
TRIM41Q8WV44 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC6.58□□□□□ -1.36
TRIM41Q8WV44 ZNF192P1-203ENST00000565888 810 ntBASIC6.58□□□□□ -1.36
TRIM41Q8WV44 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM41Q8WV44 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC6.58□□□□□ -1.36
TRIM41Q8WV44 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM41Q8WV44 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM41Q8WV44 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TRIM41Q8WV44 ZNF962P-201ENST00000443465 3140 ntBASIC6.57□□□□□ -1.36
TRIM41Q8WV44 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
TRIM41Q8WV44 MTND5P35-201ENST00000557537 1720 ntBASIC6.57□□□□□ -1.36
TRIM41Q8WV44 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC6.57□□□□□ -1.36
TRIM41Q8WV44 RNU6-1248P-201ENST00000391096 64 ntBASIC6.57□□□□□ -1.36
TRIM41Q8WV44 RNU6ATAC19P-201ENST00000408096 110 ntBASIC6.57□□□□□ -1.36
TRIM41Q8WV44 AC003685.2-201ENST00000422795 395 ntBASIC6.57□□□□□ -1.36
TRIM41Q8WV44 RPL23AP95-201ENST00000426806 265 ntBASIC6.57□□□□□ -1.36
TRIM41Q8WV44 IFNWP4-201ENST00000453148 294 ntBASIC6.57□□□□□ -1.36
TRIM41Q8WV44 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM41Q8WV44 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC6.57□□□□□ -1.36
TRIM41Q8WV44 AC019159.1-201ENST00000605094 187 ntBASIC6.57□□□□□ -1.36
TRIM41Q8WV44 AL033523.1-201ENST00000605153 153 ntBASIC6.57□□□□□ -1.36
TRIM41Q8WV44 AC015813.4-201ENST00000610469 179 ntBASIC6.57□□□□□ -1.36
TRIM41Q8WV44 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM41Q8WV44 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC6.57□□□□□ -1.36
TRIM41Q8WV44 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC6.57□□□□□ -1.36
TRIM41Q8WV44 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
TRIM41Q8WV44 AK9-203ENST00000368948 2478 ntTSL 5 BASIC6.56□□□□□ -1.36
TRIM41Q8WV44 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM41Q8WV44 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM41Q8WV44 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
TRIM41Q8WV44 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM41Q8WV44 RNU6-199P-201ENST00000362954 107 ntBASIC6.56□□□□□ -1.36
TRIM41Q8WV44 RAB28P5-201ENST00000427490 651 ntBASIC6.56□□□□□ -1.36
TRIM41Q8WV44 AC016632.1-201ENST00000503994 196 ntBASIC6.56□□□□□ -1.36
TRIM41Q8WV44 AC097462.2-201ENST00000504623 481 ntBASIC6.56□□□□□ -1.36
TRIM41Q8WV44 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM41Q8WV44 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
TRIM41Q8WV44 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
TRIM41Q8WV44 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM41Q8WV44 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
TRIM41Q8WV44 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC6.56□□□□□ -1.36
TRIM41Q8WV44 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
TRIM41Q8WV44 AL592437.2-201ENST00000421655 2434 ntBASIC6.55□□□□□ -1.36
TRIM41Q8WV44 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC6.55□□□□□ -1.36
TRIM41Q8WV44 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
TRIM41Q8WV44 RNU6-942P-201ENST00000363002 107 ntBASIC6.55□□□□□ -1.36
TRIM41Q8WV44 RNA5SP97-201ENST00000365006 84 ntBASIC6.55□□□□□ -1.36
TRIM41Q8WV44 Z98749.2-208ENST00000381646 500 ntBASIC6.55□□□□□ -1.36
TRIM41Q8WV44 MIR513A2-201ENST00000385249 127 ntBASIC6.55□□□□□ -1.36
TRIM41Q8WV44 SNORA3.3-201ENST00000408712 125 ntBASIC6.55□□□□□ -1.36
TRIM41Q8WV44 RNA5SP296-201ENST00000410523 111 ntBASIC6.55□□□□□ -1.36
TRIM41Q8WV44 FTH1P6-201ENST00000430768 320 ntBASIC6.55□□□□□ -1.36
TRIM41Q8WV44 AC069285.2-201ENST00000440210 275 ntBASIC6.55□□□□□ -1.36
TRIM41Q8WV44 RPL23AP14-201ENST00000468281 468 ntBASIC6.55□□□□□ -1.36
TRIM41Q8WV44 AP002884.2-201ENST00000471647 395 ntBASIC6.55□□□□□ -1.36
TRIM41Q8WV44 RPS27P26-201ENST00000494583 239 ntBASIC6.55□□□□□ -1.36
TRIM41Q8WV44 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms