Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC005086.4-201ENST00000623065 213 ntBASIC4□□□□□ -1.77
RSPO4Q2I0M5 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4□□□□□ -1.77
RSPO4Q2I0M5 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RSPO4Q2I0M5 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4□□□□□ -1.77
RSPO4Q2I0M5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
RSPO4Q2I0M5 MAPK10-372ENST00000641954 3413 ntBASIC4□□□□□ -1.77
RSPO4Q2I0M5 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4□□□□□ -1.77
RSPO4Q2I0M5 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
RSPO4Q2I0M5 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4□□□□□ -1.77
RSPO4Q2I0M5 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4□□□□□ -1.77
RSPO4Q2I0M5 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 MARK2P15-201ENST00000432204 2186 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 MIR367-201ENST00000362299 68 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 RNU6-1285P-201ENST00000363480 105 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 Y_RNA.368-201ENST00000365547 113 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 MIR1302-5-201ENST00000408164 150 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 MIR1271-201ENST00000408537 86 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 RNA5SP296-201ENST00000410523 111 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 Z74021.1-201ENST00000423610 407 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 AC098614.2-201ENST00000426040 255 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 AP000705.1-201ENST00000454567 350 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 AC006026.2-201ENST00000457376 180 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 RNU7-141P-201ENST00000459304 62 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 RNA5SP103-201ENST00000459503 118 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 RNA5SP290-201ENST00000517133 127 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 AC093331.1-201ENST00000521474 169 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 MIR3936-201ENST00000584304 110 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 RPL30P11-203ENST00000598995 310 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 AC009831.4-201ENST00000620744 325 ntBASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
RSPO4Q2I0M5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 Z82217.1-201ENST00000625157 8149 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 Y_RNA.85-201ENST00000363014 111 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 SNORD45.3-201ENST00000363836 72 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 Y_RNA.220-201ENST00000364244 109 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 RNU6-1074P-201ENST00000383995 104 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 SNORA36A-201ENST00000384221 132 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 RNY1P7-201ENST00000384743 110 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 AL603914.1-201ENST00000401964 204 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 AL031003.1-201ENST00000404229 172 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 U3.37-201ENST00000408528 213 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 snoU13.3-201ENST00000459441 104 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 RPS20P22-201ENST00000473700 357 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 RN7SL429P-201ENST00000479090 223 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 RN7SL489P-201ENST00000486185 223 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 RN7SL327P-201ENST00000488659 223 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 Y_RNA.690-201ENST00000516603 95 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 AP004607.1-201ENST00000524456 203 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 AC015720.1-201ENST00000565251 277 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 AC087499.8-201ENST00000578406 226 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 AL137843.1-201ENST00000605078 385 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 RN7SL853P-201ENST00000617250 223 ntBASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
RSPO4Q2I0M5 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 AC022336.2-201ENST00000568966 2538 ntBASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
RSPO4Q2I0M5 RNU6-144P-201ENST00000383951 107 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms