Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 RNU6-1132P-201ENST00000459214 107 ntBASIC3.51□□□□□ -1.85
ATF4P18848 SCARNA22-201ENST00000503991 125 ntBASIC3.51□□□□□ -1.85
ATF4P18848 RNU6-107P-201ENST00000516643 102 ntBASIC3.51□□□□□ -1.85
ATF4P18848 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.51□□□□□ -1.85
ATF4P18848 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.51□□□□□ -1.85
ATF4P18848 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC3.51□□□□□ -1.85
ATF4P18848 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.51□□□□□ -1.85
ATF4P18848 AC006130.2-201ENST00000586202 326 ntBASIC3.51□□□□□ -1.85
ATF4P18848 BRDTP1-201ENST00000605735 677 ntBASIC3.51□□□□□ -1.85
ATF4P18848 RNVU1-4-201ENST00000612985 164 ntBASIC3.51□□□□□ -1.85
ATF4P18848 AC068205.3-201ENST00000636385 468 ntBASIC3.51□□□□□ -1.85
ATF4P18848 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.51□□□□□ -1.85
ATF4P18848 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
ATF4P18848 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ATF4P18848 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
ATF4P18848 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.5□□□□□ -1.85
ATF4P18848 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
ATF4P18848 Z82209.1-201ENST00000422141 2135 ntBASIC3.5□□□□□ -1.85
ATF4P18848 AC138915.1-201ENST00000565427 1685 ntBASIC3.5□□□□□ -1.85
ATF4P18848 RNU1-72P-201ENST00000362976 153 ntBASIC3.5□□□□□ -1.85
ATF4P18848 U8.12-201ENST00000384701 133 ntBASIC3.5□□□□□ -1.85
ATF4P18848 Y_RNA.581-201ENST00000391017 97 ntBASIC3.5□□□□□ -1.85
ATF4P18848 RNU6-1203P-201ENST00000410703 110 ntBASIC3.5□□□□□ -1.85
ATF4P18848 RNU2-63P-201ENST00000410792 194 ntBASIC3.5□□□□□ -1.85
ATF4P18848 RPL23AP36-201ENST00000413895 458 ntBASIC3.5□□□□□ -1.85
ATF4P18848 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.5□□□□□ -1.85
ATF4P18848 AL645608.4-201ENST00000423619 154 ntBASIC3.5□□□□□ -1.85
ATF4P18848 RPS12P10-201ENST00000427031 377 ntBASIC3.5□□□□□ -1.85
ATF4P18848 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.5□□□□□ -1.85
ATF4P18848 AC009220.1-201ENST00000451614 275 ntBASIC3.5□□□□□ -1.85
ATF4P18848 KRTAP5-14P-201ENST00000502328 121 ntBASIC3.5□□□□□ -1.85
ATF4P18848 RNU1-117P-201ENST00000517041 158 ntBASIC3.5□□□□□ -1.85
ATF4P18848 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.5□□□□□ -1.85
ATF4P18848 AP001880.2-201ENST00000538233 448 ntBASIC3.5□□□□□ -1.85
ATF4P18848 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.5□□□□□ -1.85
ATF4P18848 U3.53-201ENST00000628922 216 ntBASIC3.5□□□□□ -1.85
ATF4P18848 SNORA50A-202ENST00000629536 136 ntBASIC3.5□□□□□ -1.85
ATF4P18848 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.5□□□□□ -1.85
ATF4P18848 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
ATF4P18848 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
ATF4P18848 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
ATF4P18848 AC000403.1-201ENST00000613696 3585 ntBASIC3.5□□□□□ -1.85
ATF4P18848 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ATF4P18848 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ATF4P18848 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC3.5□□□□□ -1.85
ATF4P18848 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ATF4P18848 snoU2_19.2-201ENST00000363024 80 ntBASIC3.49□□□□□ -1.85
ATF4P18848 MIR215-201ENST00000384858 110 ntBASIC3.49□□□□□ -1.85
ATF4P18848 AC005154.2-201ENST00000438110 379 ntBASIC3.49□□□□□ -1.85
ATF4P18848 AL161788.1-201ENST00000441805 169 ntBASIC3.49□□□□□ -1.85
ATF4P18848 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.49□□□□□ -1.85
ATF4P18848 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.49□□□□□ -1.85
ATF4P18848 DEFB131C-201ENST00000528817 165 ntBASIC3.49□□□□□ -1.85
ATF4P18848 AC023157.2-201ENST00000540596 141 ntBASIC3.49□□□□□ -1.85
ATF4P18848 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.49□□□□□ -1.85
ATF4P18848 IPO5P1-202ENST00000600039 287 ntBASIC3.49□□□□□ -1.85
ATF4P18848 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC3.49□□□□□ -1.85
ATF4P18848 MIR7153-201ENST00000637758 57 ntBASIC3.49□□□□□ -1.85
ATF4P18848 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ATF4P18848 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ATF4P18848 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ATF4P18848 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ATF4P18848 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.48□□□□□ -1.85
ATF4P18848 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
ATF4P18848 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
ATF4P18848 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ATF4P18848 RNU1-75P-201ENST00000347264 129 ntBASIC3.48□□□□□ -1.85
ATF4P18848 Y_RNA.307-201ENST00000365022 117 ntBASIC3.48□□□□□ -1.85
ATF4P18848 RNU6-1175P-201ENST00000365200 107 ntBASIC3.48□□□□□ -1.85
ATF4P18848 Y_RNA.350-201ENST00000365409 98 ntBASIC3.48□□□□□ -1.85
ATF4P18848 SNORA62-201ENST00000365493 153 ntBASIC3.48□□□□□ -1.85
ATF4P18848 Y_RNA.415-201ENST00000384012 112 ntBASIC3.48□□□□□ -1.85
ATF4P18848 RNU6-1026P-201ENST00000384465 108 ntBASIC3.48□□□□□ -1.85
ATF4P18848 Y_RNA.570-201ENST00000384750 101 ntBASIC3.48□□□□□ -1.85
ATF4P18848 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.48□□□□□ -1.85
ATF4P18848 AC002075.2-201ENST00000425207 252 ntBASIC3.48□□□□□ -1.85
ATF4P18848 RAB28P5-201ENST00000427490 651 ntBASIC3.48□□□□□ -1.85
ATF4P18848 TPT1P12-201ENST00000448968 492 ntBASIC3.48□□□□□ -1.85
ATF4P18848 AC090515.1-201ENST00000465295 476 ntBASIC3.48□□□□□ -1.85
ATF4P18848 RPL39P38-201ENST00000467018 153 ntBASIC3.48□□□□□ -1.85
ATF4P18848 RPL36AP41-201ENST00000493820 306 ntBASIC3.48□□□□□ -1.85
ATF4P18848 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC3.48□□□□□ -1.85
ATF4P18848 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC3.48□□□□□ -1.85
ATF4P18848 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.48□□□□□ -1.85
ATF4P18848 MIR4423-201ENST00000580922 80 ntBASIC3.48□□□□□ -1.85
ATF4P18848 AC037487.3-201ENST00000606668 112 ntBASIC3.48□□□□□ -1.85
ATF4P18848 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.48□□□□□ -1.85
ATF4P18848 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
ATF4P18848 AL355596.1-201ENST00000565399 3996 ntBASIC3.48□□□□□ -1.85
ATF4P18848 MTND5P6-201ENST00000422338 1798 ntBASIC3.48□□□□□ -1.85
ATF4P18848 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.48□□□□□ -1.85
ATF4P18848 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ATF4P18848 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.47□□□□□ -1.85
ATF4P18848 AL391987.6-201ENST00000305671 199 ntBASIC3.47□□□□□ -1.85
ATF4P18848 Y_RNA.14-201ENST00000362415 103 ntBASIC3.47□□□□□ -1.85
ATF4P18848 SNORA70F-201ENST00000384142 135 ntBASIC3.47□□□□□ -1.85
ATF4P18848 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
ATF4P18848 AC004866.1-201ENST00000411748 78 ntBASIC3.47□□□□□ -1.85
ATF4P18848 ELOCP21-201ENST00000412558 336 ntBASIC3.47□□□□□ -1.85
ATF4P18848 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 163 ms