Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 Y_RNA.122-201ENST00000363331 96 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 SNORD115-8-201ENST00000363856 82 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 RNU6-879P-201ENST00000364328 108 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 Y_RNA.230-201ENST00000364348 109 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 SNORD115-38-201ENST00000365037 82 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 RNY1P5-201ENST00000383890 115 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 RNU6-187P-201ENST00000384139 106 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 Y_RNA.506-201ENST00000384494 102 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 MIR93-201ENST00000385024 80 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 UBA52P6-201ENST00000399822 382 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 RN7SKP111-201ENST00000410349 271 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 RNU6-1245P-201ENST00000411130 106 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 AC098831.1-201ENST00000440661 216 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 RPL23AP14-201ENST00000468281 468 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 RN7SL429P-201ENST00000479090 223 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 RN7SL489P-201ENST00000486185 223 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 RN7SL327P-201ENST00000488659 223 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 RPL7P47-201ENST00000497299 556 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 AC097462.2-201ENST00000504623 481 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 RNU6-1198P-201ENST00000516904 67 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 MIR5571-201ENST00000577998 113 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 BRDTP1-201ENST00000605735 677 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 RN7SL853P-201ENST00000617250 223 ntBASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HCFC2Q9Y5Z7 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 Y_RNA.275-201ENST00000364726 110 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 Y_RNA.292-201ENST00000364904 97 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 SNORA29-201ENST00000384183 140 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 Y_RNA.569-201ENST00000384749 103 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 MIR1289-1-201ENST00000408836 144 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 COX6CP10-201ENST00000416832 224 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 Z75741.1-201ENST00000446793 314 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 RNU6-579P-201ENST00000516879 102 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 RN7SKP209-201ENST00000516888 304 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 RN7SKP272-201ENST00000516988 232 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 CR383656.8-201ENST00000549046 145 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 AC027288.2-201ENST00000553028 243 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 AC011921.3-201ENST00000605540 361 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 MIR6134-201ENST00000617606 109 ntBASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
HCFC2Q9Y5Z7 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
HCFC2Q9Y5Z7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
HCFC2Q9Y5Z7 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
HCFC2Q9Y5Z7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
HCFC2Q9Y5Z7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 FTLP6-201ENST00000355274 422 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 Y_RNA.136-201ENST00000363444 102 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-1020P-201ENST00000363684 107 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 U8.10-201ENST00000384260 133 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 Y_RNA.510-201ENST00000384511 114 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 MIR10B-201ENST00000385011 110 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-1197P-201ENST00000391183 107 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 AC006028.1-201ENST00000438379 402 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 TMSB4XP3-201ENST00000445144 114 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 SSXP4-201ENST00000451349 245 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 AC078817.1-201ENST00000492623 435 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 FCF1P8-201ENST00000510322 597 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 AC087441.2-201ENST00000529141 262 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 EIF4BP1-201ENST00000554881 351 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 MIR5004-201ENST00000579078 107 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 MIR4276-201ENST00000584832 70 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 AC104984.5-201ENST00000586878 94 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 MZT1P2-201ENST00000604387 248 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 U6.106-201ENST00000636360 105 ntBASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HCFC2Q9Y5Z7 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-740P-201ENST00000364734 105 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-281P-201ENST00000384212 103 ntBASIC3.64□□□□□ -1.83
HCFC2Q9Y5Z7 RNU6-1145P-201ENST00000384246 107 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 149.7 ms