Protein–RNA interactions for Protein: Q9NU39

FOXD4L1, Forkhead box protein D4-like 1, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4L1Q9NU39 ATP6V0E1P1-201ENST00000412537 226 ntBASIC6.3□□□□□ -1.4
FOXD4L1Q9NU39 RN7SL41P-201ENST00000476144 297 ntBASIC6.3□□□□□ -1.4
FOXD4L1Q9NU39 S100A11P1-201ENST00000477525 312 ntBASIC6.3□□□□□ -1.4
FOXD4L1Q9NU39 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.3□□□□□ -1.4
FOXD4L1Q9NU39 AC073413.2-201ENST00000604332 360 ntBASIC6.3□□□□□ -1.4
FOXD4L1Q9NU39 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
FOXD4L1Q9NU39 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
FOXD4L1Q9NU39 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC6.3□□□□□ -1.4
FOXD4L1Q9NU39 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC6.3□□□□□ -1.4
FOXD4L1Q9NU39 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 RNY3P2-201ENST00000362918 102 ntBASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 RNU1-19P-201ENST00000363306 165 ntBASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 RNU1-20P-201ENST00000363314 162 ntBASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 RPS3AP2-201ENST00000407190 754 ntBASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 AC007738.1-201ENST00000413892 348 ntBASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 RNU7-164P-201ENST00000459221 62 ntBASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 RN7SL72P-201ENST00000460697 269 ntBASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 AC006445.1-201ENST00000491925 405 ntBASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 AC040958.1-201ENST00000561102 201 ntBASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 AC012616.1-201ENST00000600294 197 ntBASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 AC090115.4-201ENST00000609970 188 ntBASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
FOXD4L1Q9NU39 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 MIR375-201ENST00000362103 64 ntBASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 RNU6-349P-201ENST00000362402 107 ntBASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 RNY1P1-201ENST00000364372 112 ntBASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 MIR802-201ENST00000390235 94 ntBASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 IGLVIV-65-201ENST00000517313 360 ntBASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 IGLL4P-201ENST00000614590 133 ntBASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
FOXD4L1Q9NU39 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 ZNF720P1-201ENST00000562403 1939 ntBASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 Y_RNA.466-201ENST00000384294 113 ntBASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 RN7SL814P-201ENST00000487715 300 ntBASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 COX6B1P5-201ENST00000509843 249 ntBASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 AL138895.2-201ENST00000603019 178 ntBASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 MED23-203ENST00000368058 4576 ntTSL 5 BASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 AP003122.5-201ENST00000527668 3766 ntBASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.27□□□□□ -1.41
FOXD4L1Q9NU39 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 RNU6-1189P-201ENST00000383958 107 ntBASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 MIR1255A-201ENST00000408338 113 ntBASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 RNA5SP104-201ENST00000410989 118 ntBASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 RPS15AP28-201ENST00000435088 386 ntBASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 RPL35AP21-201ENST00000437667 333 ntBASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 AC022137.1-201ENST00000483735 151 ntBASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 RAC1P2-201ENST00000511164 579 ntBASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 SCARNA16.4-201ENST00000516956 187 ntBASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 SNORA31.21-201ENST00000517180 77 ntBASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
FOXD4L1Q9NU39 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
FOXD4L1Q9NU39 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXD4L1Q9NU39 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
FOXD4L1Q9NU39 RNY1P6-201ENST00000384193 109 ntBASIC6.25□□□□□ -1.41
FOXD4L1Q9NU39 MIR589-201ENST00000385238 99 ntBASIC6.25□□□□□ -1.41
FOXD4L1Q9NU39 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.25□□□□□ -1.41
FOXD4L1Q9NU39 COX6B1P2-201ENST00000489624 230 ntBASIC6.25□□□□□ -1.41
FOXD4L1Q9NU39 SNORA4.4-201ENST00000515921 135 ntBASIC6.25□□□□□ -1.41
FOXD4L1Q9NU39 RN7SKP21-201ENST00000516503 220 ntBASIC6.25□□□□□ -1.41
FOXD4L1Q9NU39 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
FOXD4L1Q9NU39 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
FOXD4L1Q9NU39 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms