Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
LRCH3Q96II8 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
LRCH3Q96II8 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LRCH3Q96II8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LRCH3Q96II8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LRCH3Q96II8 AC005332.5-201ENST00000591222 2919 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LRCH3Q96II8 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.92□□□□□ -1.62
LRCH3Q96II8 Y_RNA.124-201ENST00000363339 93 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 RNA5SP130-201ENST00000364431 114 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 MIR570-201ENST00000384917 97 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
LRCH3Q96II8 AC244098.2-201ENST00000422068 99 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 AL139281.1-201ENST00000422120 335 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 RPL35AP21-201ENST00000437667 333 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.92□□□□□ -1.62
LRCH3Q96II8 AL021397.1-201ENST00000451806 248 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
LRCH3Q96II8 RN7SL558P-201ENST00000497468 299 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 AIG1P1-201ENST00000503376 148 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 HMGB1P22-201ENST00000505315 124 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 AC107918.3-201ENST00000533272 382 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
LRCH3Q96II8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.92□□□□□ -1.62
LRCH3Q96II8 AC006272.2-201ENST00000594725 163 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 AL451007.1-201ENST00000595491 289 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 TCL6_2.1-201ENST00000615162 119 ntBASIC4.92□□□□□ -1.62
LRCH3Q96II8 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LRCH3Q96II8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LRCH3Q96II8 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
LRCH3Q96II8 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
LRCH3Q96II8 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.92□□□□□ -1.62
LRCH3Q96II8 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LRCH3Q96II8 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
LRCH3Q96II8 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.92□□□□□ -1.62
LRCH3Q96II8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRCH3Q96II8 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LRCH3Q96II8 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.91□□□□□ -1.62
LRCH3Q96II8 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LRCH3Q96II8 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
LRCH3Q96II8 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
LRCH3Q96II8 MIR494-201ENST00000349529 81 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 RNU4-41P-201ENST00000364426 143 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 RNA5-8SP4-201ENST00000365096 150 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 SNORD116-13-201ENST00000384408 92 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 RNU6-813P-201ENST00000384691 107 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 RNA5SP225-201ENST00000410874 135 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 RNU2-32P-201ENST00000411193 191 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 TOMM22P1-201ENST00000418578 312 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 RNU6-437P-201ENST00000459408 95 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.91□□□□□ -1.62
LRCH3Q96II8 RNU6-109P-201ENST00000516364 107 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 RNU6-184P-201ENST00000516514 107 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 AC027176.1-201ENST00000560204 514 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 HSPE1P5-201ENST00000561489 272 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 SNORA74C-1-201ENST00000580726 201 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 MIR5006-201ENST00000583027 110 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 AL049861.1-201ENST00000603130 150 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.91□□□□□ -1.62
LRCH3Q96II8 AL121772.2-201ENST00000614331 297 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.91□□□□□ -1.62
LRCH3Q96II8 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRCH3Q96II8 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRCH3Q96II8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
LRCH3Q96II8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRCH3Q96II8 ZFRP1-201ENST00000457579 2970 ntBASIC4.91□□□□□ -1.62
LRCH3Q96II8 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LRCH3Q96II8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.91□□□□□ -1.62
LRCH3Q96II8 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LRCH3Q96II8 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.91□□□□□ -1.62
LRCH3Q96II8 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LRCH3Q96II8 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
LRCH3Q96II8 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LRCH3Q96II8 RNU6-487P-201ENST00000365430 104 ntBASIC4.9□□□□□ -1.63
LRCH3Q96II8 UBBP2-201ENST00000376781 231 ntBASIC4.9□□□□□ -1.63
LRCH3Q96II8 DYNLT3P1-201ENST00000378574 347 ntBASIC4.9□□□□□ -1.63
LRCH3Q96II8 RNU6-1279P-201ENST00000383917 103 ntBASIC4.9□□□□□ -1.63
LRCH3Q96II8 CALM2P4-201ENST00000430810 426 ntBASIC4.9□□□□□ -1.63
LRCH3Q96II8 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.9□□□□□ -1.63
LRCH3Q96II8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.9□□□□□ -1.63
LRCH3Q96II8 RPL23AP54-201ENST00000495129 419 ntBASIC4.9□□□□□ -1.63
LRCH3Q96II8 RNU6-513P-201ENST00000516104 104 ntBASIC4.9□□□□□ -1.63
LRCH3Q96II8 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.9□□□□□ -1.63
LRCH3Q96II8 MIR3936-201ENST00000584304 110 ntBASIC4.9□□□□□ -1.63
LRCH3Q96II8 POLR3GP1-201ENST00000594073 261 ntBASIC4.9□□□□□ -1.63
LRCH3Q96II8 RNU6-94P-201ENST00000607728 107 ntBASIC4.9□□□□□ -1.63
LRCH3Q96II8 AL035470.1-201ENST00000622571 220 ntBASIC4.9□□□□□ -1.63
LRCH3Q96II8 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
LRCH3Q96II8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LRCH3Q96II8 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LRCH3Q96II8 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.63
LRCH3Q96II8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
LRCH3Q96II8 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
LRCH3Q96II8 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LRCH3Q96II8 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LRCH3Q96II8 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
LRCH3Q96II8 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.89□□□□□ -1.63
LRCH3Q96II8 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRCH3Q96II8 Y_RNA.91-201ENST00000363042 107 ntBASIC4.89□□□□□ -1.63
LRCH3Q96II8 U3.8-201ENST00000363675 217 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 460.8 ms