Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.11□□□□□ -1.91
CLRN3Q8NCR9 MIR4659A-201ENST00000580269 81 ntBASIC3.11□□□□□ -1.91
CLRN3Q8NCR9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.11□□□□□ -1.91
CLRN3Q8NCR9 AC006130.2-201ENST00000586202 326 ntBASIC3.11□□□□□ -1.91
CLRN3Q8NCR9 TCL6_2.1-201ENST00000615162 119 ntBASIC3.11□□□□□ -1.91
CLRN3Q8NCR9 MIR5739-201ENST00000619803 80 ntBASIC3.11□□□□□ -1.91
CLRN3Q8NCR9 MIR6730-201ENST00000622213 67 ntBASIC3.11□□□□□ -1.91
CLRN3Q8NCR9 MIR6719-201ENST00000622428 87 ntBASIC3.11□□□□□ -1.91
CLRN3Q8NCR9 AC018692.3-201ENST00000623929 123 ntBASIC3.11□□□□□ -1.91
CLRN3Q8NCR9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLRN3Q8NCR9 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 RNU1-72P-201ENST00000362976 153 ntBASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 RNU6-398P-201ENST00000384143 109 ntBASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 RNU6-1145P-201ENST00000384246 107 ntBASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 AL513477.1-202ENST00000417061 214 ntBASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 AC027124.2-201ENST00000428249 105 ntBASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 CBX3P6-201ENST00000430257 527 ntBASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 RPL23AP81-201ENST00000455252 467 ntBASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 RN7SL283P-201ENST00000489055 303 ntBASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 RNA5SP385-201ENST00000515947 110 ntBASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 RNU6-397P-201ENST00000516226 104 ntBASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 AP001880.2-201ENST00000538233 448 ntBASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 AC130454.1-201ENST00000622948 401 ntBASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 AC093010.3-201ENST00000570269 15214 ntBASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLRN3Q8NCR9 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 RNU6-238P-201ENST00000363313 106 ntBASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 RNU6-770P-201ENST00000363929 105 ntBASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 SNORD32B-201ENST00000364460 84 ntBASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 Y_RNA.556-201ENST00000384677 113 ntBASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 MIR659-201ENST00000384963 97 ntBASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 Y_RNA.597-201ENST00000410463 100 ntBASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 AC005154.2-201ENST00000438110 379 ntBASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 CKS1BP2-201ENST00000497342 240 ntBASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 AC231760.1-201ENST00000498002 260 ntBASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 AC083906.5-201ENST00000503722 328 ntBASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 RNY3P15-201ENST00000516297 97 ntBASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 MIR4506-201ENST00000584693 77 ntBASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 AL355596.1-201ENST00000565399 3996 ntBASIC3.09□□□□□ -1.91
CLRN3Q8NCR9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.09□□□□□ -1.92
CLRN3Q8NCR9 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
CLRN3Q8NCR9 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.09□□□□□ -1.92
CLRN3Q8NCR9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
CLRN3Q8NCR9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 Z82209.1-201ENST00000422141 2135 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 MTND5P35-201ENST00000557537 1720 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 MIR148B-201ENST00000362252 99 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 RNA5SP240-201ENST00000365355 128 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 SET-203ENST00000372688 801 ntTSL 2 BASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 RNA5SP87-201ENST00000384155 118 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 FO393413.1-201ENST00000402892 195 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 MIR1294-201ENST00000408503 142 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 TMSB10P2-201ENST00000416049 131 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 AC004386.2-201ENST00000441858 148 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 AC010095.1-201ENST00000443543 144 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 AC009237.7-201ENST00000447357 229 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 CYCSP35-201ENST00000451978 304 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 AC011276.1-201ENST00000469688 323 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 RN7SL132P-201ENST00000478131 296 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 AC074133.1-201ENST00000515696 183 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 RNU6-344P-201ENST00000516635 111 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 AL161670.1-201ENST00000554348 137 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 AC090877.1-201ENST00000561418 344 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 MIR4270-201ENST00000581799 70 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 MIR6853-201ENST00000619642 74 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 AC087385.3-201ENST00000620477 187 ntBASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.08□□□□□ -1.92
CLRN3Q8NCR9 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CLRN3Q8NCR9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms