Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AC008993.2-201ENST00000631744 806 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 RNU6-858P-201ENST00000362436 107 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 SNORD114-24-201ENST00000365029 72 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 MIR525-201ENST00000384978 85 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AL592310.1-201ENST00000414330 671 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AC063976.4-201ENST00000421971 163 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AL162395.1-201ENST00000457882 422 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 RNA5SP134-201ENST00000516492 96 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AC109810.1-201ENST00000534066 224 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 MIR4764-201ENST00000580680 88 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AP001429.1-201ENST00000602568 530 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AC091946.2-201ENST00000606105 291 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 BX284668.6-201ENST00000606899 438 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AC004009.2-201ENST00000623016 728 ntBASIC0.01□□□□□ -2.41
CSPG4Q6UVK1 AC134026.1-201ENST00000623249 2239 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 RNU6-543P-201ENST00000362576 108 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 AL357139.1-201ENST00000407792 426 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 AL353621.1-201ENST00000418219 243 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 MRPS18CP6-201ENST00000423587 223 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 C8orf59P1-201ENST00000429930 303 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 MTCYBP15-201ENST00000433123 1127 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 USP9YP22-201ENST00000438971 294 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 AC012308.1-201ENST00000451232 178 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0□□□□□ -2.41
CSPG4Q6UVK1 snoU13.27-201ENST00000459278 104 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 AL160314.1-201ENST00000490836 438 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 SNORA76.2-201ENST00000517095 137 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 AC104417.1-201ENST00000523974 751 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0□□□□□ -2.41
CSPG4Q6UVK1 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0□□□□□ -2.41
CSPG4Q6UVK1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC0□□□□□ -2.41
CSPG4Q6UVK1 MIR4782-201ENST00000577987 79 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 MIR3664-201ENST00000579074 99 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 AL158211.4-201ENST00000606988 584 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0□□□□□ -2.41
CSPG4Q6UVK1 AL118556.2-201ENST00000614375 824 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 MIR6516-201ENST00000630554 81 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 PCMTD1P7-201ENST00000634506 357 ntBASIC0□□□□□ -2.41
CSPG4Q6UVK1 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 RNU6-23P-201ENST00000363283 107 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 RNU6-575P-201ENST00000411326 105 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 RPS26P5-201ENST00000418544 335 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 MTND4LP11-201ENST00000422184 280 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 RPL31P54-201ENST00000429803 370 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 CETN4P-201ENST00000432407 469 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AC023194.1-201ENST00000493084 308 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 MTCYBP40-201ENST00000509390 1135 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 MTCYBP43-201ENST00000513621 740 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 RNU6-885P-201ENST00000516607 104 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AL513534.2-201ENST00000603836 250 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AL355297.3-201ENST00000604082 446 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AC096586.1-201ENST00000610267 561 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AC130324.3-201ENST00000614165 542 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 MIR4315-1-201ENST00000636800 73 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 MIR4315-2-201ENST00000640925 73 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 RNU6-1339P-201ENST00000363574 91 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 Y_RNA.332-201ENST00000365271 113 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 RNU6-878P-201ENST00000384578 110 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AL590556.1-201ENST00000423231 483 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 RPS15AP9-201ENST00000439856 381 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 BRK1P2-201ENST00000442875 223 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AL929288.2-201ENST00000446368 407 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AL031313.1-201ENST00000448435 256 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 WDR78-207ENST00000488333 613 ntTSL 3 BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 MIR4290-201ENST00000583807 95 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 AL603758.1-201ENST00000618654 241 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 SEC63P2-201ENST00000503863 1939 ntBASIC-0.01□□□□□ -2.41
CSPG4Q6UVK1 RNU5E-8P-201ENST00000363502 116 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 RNU6-438P-201ENST00000365561 103 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 SNORA36.2-201ENST00000384004 127 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 MIR601-201ENST00000385256 79 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 RNA5SP219-201ENST00000390940 113 ntBASIC-0.02□□□□□ -2.41
CSPG4Q6UVK1 AL355796.1-201ENST00000406706 323 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms