Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 AC087190.4-201ENST00000574616 8334 ntBASIC4.15□□□□□ -1.74
RNFT1Q5M7Z0 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 SNORD114-7-201ENST00000362520 77 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 Y_RNA.221-201ENST00000364248 96 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 SNORD87-201ENST00000364849 89 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 RNU6-1296P-201ENST00000383879 107 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 MIR708-201ENST00000390708 88 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 RNA5SP390-201ENST00000410191 113 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 AL356387.2-201ENST00000422272 243 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 EIF4HP2-201ENST00000424380 563 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 MTATP8P2-201ENST00000435212 202 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 RPL23AP93-201ENST00000440847 484 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 AC010618.1-201ENST00000469924 477 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 RNA5SP497-201ENST00000516081 97 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 RNA5SP464-201ENST00000516251 108 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 MED28P6-201ENST00000558776 231 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 RN7SL435P-201ENST00000584418 282 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 AC097639.2-201ENST00000603159 172 ntBASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.15□□□□□ -1.75
RNFT1Q5M7Z0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 Y_RNA.52-201ENST00000362760 96 ntBASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 MIR891A-201ENST00000401237 79 ntBASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 AC109327.1-201ENST00000471666 403 ntBASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 RN7SL41P-201ENST00000476144 297 ntBASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 RPS29P2-201ENST00000479278 136 ntBASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 AC025281.1-201ENST00000567026 265 ntBASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 MIR3939-201ENST00000582614 106 ntBASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 MIR3136-201ENST00000583498 78 ntBASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 AL590808.1-201ENST00000618696 141 ntBASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 A2MP1-204ENST00000566278 4130 ntBASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RNFT1Q5M7Z0 OR51H2P-202ENST00000641424 3046 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 AC027290.2-201ENST00000623210 18662 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 AL589743.1-201ENST00000551932 2712 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 AC126323.6-202ENST00000568092 3511 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 RNU6-778P-201ENST00000363269 103 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 RNU6-674P-201ENST00000363831 107 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 RNA5SP504-201ENST00000410676 117 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 COX6CP6-201ENST00000490840 228 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 ATP5EP1-201ENST00000510257 156 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 RNA5SP249-201ENST00000516127 99 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 AC026421.1-201ENST00000519101 163 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 AC027176.1-201ENST00000560204 514 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 MIR3138-201ENST00000585238 82 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 VN1R85P-201ENST00000601587 426 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 AL138880.2-201ENST00000616214 239 ntBASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.13□□□□□ -1.75
RNFT1Q5M7Z0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 MAPK10-320ENST00000641462 6696 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 RNA5SP479-201ENST00000364858 117 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 RNU1-64P-201ENST00000365443 163 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 RNU6-1323P-201ENST00000384025 107 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 Y_RNA.466-201ENST00000384294 113 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 RNU6-140P-201ENST00000384566 108 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 MIR590-201ENST00000385008 97 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 MIR624-201ENST00000385217 97 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 AL139281.1-201ENST00000422120 335 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 CKS1BP6-201ENST00000424932 240 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 AC092047.1-201ENST00000424997 240 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 AC004975.1-201ENST00000428733 208 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 CALM2P4-201ENST00000430810 426 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 RNU6-437P-201ENST00000459408 95 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 RNU6-109P-201ENST00000516364 107 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 RNU6-184P-201ENST00000516514 107 ntBASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.12□□□□□ -1.75
RNFT1Q5M7Z0 AC114781.5-201ENST00000615297 108 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms