Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AL355375.2-201ENST00000574825 175 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.49□□□□□ -2.01
CLDN20P56880 AC078795.3-201ENST00000602913 472 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 AC018462.2-201ENST00000605375 395 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 MIR3976-201ENST00000606807 139 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.49□□□□□ -2.01
CLDN20P56880 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLDN20P56880 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.48□□□□□ -2.01
CLDN20P56880 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.48□□□□□ -2.01
CLDN20P56880 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.48□□□□□ -2.01
CLDN20P56880 RNU6-486P-201ENST00000363116 107 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 RNU4-73P-201ENST00000363164 141 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 SNORD32A-201ENST00000364805 84 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 U8.8-201ENST00000365399 135 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 Y_RNA.384-201ENST00000383909 102 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 Y_RNA.387-201ENST00000383918 102 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 RNU6-43P-201ENST00000384302 107 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 MIR521-1-201ENST00000384902 87 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 BTF3L4P2-201ENST00000392798 346 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 RNU4-14P-201ENST00000410858 122 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 HMGN2P35-201ENST00000412164 270 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN20P56880 AC097463.2-201ENST00000421074 142 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.48□□□□□ -2.01
CLDN20P56880 RPL23AP95-201ENST00000426806 265 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 MICF-203ENST00000432679 129 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN20P56880 UBBP3-201ENST00000445497 241 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 AL031659.1-201ENST00000447075 539 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CLDN20P56880 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN20P56880 ACA59.1-201ENST00000515966 143 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 RNA5SP356-201ENST00000515972 94 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN20P56880 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.48□□□□□ -2.01
CLDN20P56880 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.48□□□□□ -2.01
CLDN20P56880 C8orf59P2-201ENST00000603441 271 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 AC098657.3-201ENST00000620434 263 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 AL359697.1-201ENST00000624879 587 ntBASIC2.48□□□□□ -2.01
CLDN20P56880 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CLDN20P56880 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.48□□□□□ -2.01
CLDN20P56880 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.48□□□□□ -2.01
CLDN20P56880 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLDN20P56880 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CLDN20P56880 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CLDN20P56880 Z75746.1-201ENST00000440243 2080 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CLDN20P56880 RNU6-797P-201ENST00000363101 109 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 RNU6-1141P-201ENST00000364520 107 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 RPL21P75-201ENST00000396599 483 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 RPL21P28-201ENST00000401418 483 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 RPL19P1-201ENST00000411635 428 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 CYCSP48-201ENST00000417124 323 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 USP9YP30-201ENST00000430729 455 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.47□□□□□ -2.01
CLDN20P56880 RPL21P39-201ENST00000463605 483 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 AC093591.1-201ENST00000491435 481 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 RPL21P16-201ENST00000495531 483 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN20P56880 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN20P56880 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN20P56880 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.47□□□□□ -2.01
CLDN20P56880 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN20P56880 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN20P56880 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.47□□□□□ -2.01
CLDN20P56880 MIR3605-201ENST00000583214 100 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 AC073410.2-201ENST00000603240 332 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 AL159153.1-201ENST00000619688 317 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.47□□□□□ -2.01
CLDN20P56880 AL359757.2-201ENST00000624309 274 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 SCARNA15.3-201ENST00000626315 122 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 SCARNA4.1-201ENST00000628597 123 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 MIR7157-201ENST00000635801 60 ntBASIC2.47□□□□□ -2.01
CLDN20P56880 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
CLDN20P56880 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.46□□□□□ -2.01
CLDN20P56880 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CLDN20P56880 MIR6073-201ENST00000352083 89 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CLDN20P56880 SNORD56.5-201ENST00000364281 72 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 RNU6-596P-201ENST00000365395 98 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 RNU6-1297P-201ENST00000384415 104 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 RNU1-57P-201ENST00000384491 166 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CLDN20P56880 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CLDN20P56880 FO393413.1-201ENST00000402892 195 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 RNU6-1328P-201ENST00000410938 106 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.46□□□□□ -2.02
CLDN20P56880 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.46□□□□□ -2.02
CLDN20P56880 FTH1P25-201ENST00000447665 469 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.46□□□□□ -2.02
CLDN20P56880 snoU13.14-201ENST00000459372 104 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.46□□□□□ -2.02
CLDN20P56880 AC026782.1-201ENST00000512952 449 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 RNU6-559P-201ENST00000516151 98 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 Y_RNA.708-201ENST00000516950 96 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.46□□□□□ -2.02
CLDN20P56880 AC115990.1-201ENST00000526957 301 ntBASIC2.46□□□□□ -2.02
CLDN20P56880 HSPE1P20-201ENST00000538133 289 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms