Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 AC080128.1-201ENST00000474389 1917 ntBASIC4.45□□□□□ -1.7
H3BM21 Y_RNA.49-201ENST00000362714 112 ntBASIC4.45□□□□□ -1.7
H3BM21 Y_RNA.593-201ENST00000410292 98 ntBASIC4.45□□□□□ -1.7
H3BM21 RN7SKP27-201ENST00000410684 333 ntBASIC4.45□□□□□ -1.7
H3BM21 AC008134.1-201ENST00000420943 193 ntBASIC4.45□□□□□ -1.7
H3BM21 PGBD4P5-201ENST00000445958 426 ntBASIC4.45□□□□□ -1.7
H3BM21 PHBP16-201ENST00000446318 950 ntBASIC4.45□□□□□ -1.7
H3BM21 AL359073.1-201ENST00000448036 403 ntBASIC4.45□□□□□ -1.7
H3BM21 RPL7AP28-201ENST00000464513 571 ntBASIC4.45□□□□□ -1.7
H3BM21 AL132838.2-201ENST00000492041 314 ntBASIC4.45□□□□□ -1.7
H3BM21 MIR1254-2-201ENST00000579553 63 ntBASIC4.45□□□□□ -1.7
H3BM21 FAM71BP1-201ENST00000604431 523 ntBASIC4.45□□□□□ -1.7
H3BM21 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
H3BM21 AL592437.2-201ENST00000421655 2434 ntBASIC4.45□□□□□ -1.7
H3BM21 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
H3BM21 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
H3BM21 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
H3BM21 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
H3BM21 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
H3BM21 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
H3BM21 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
H3BM21 RNU1-94P-201ENST00000362627 173 ntBASIC4.44□□□□□ -1.7
H3BM21 RNA5SP479-201ENST00000364858 117 ntBASIC4.44□□□□□ -1.7
H3BM21 MIR153-1-201ENST00000384914 90 ntBASIC4.44□□□□□ -1.7
H3BM21 MIR659-201ENST00000384963 97 ntBASIC4.44□□□□□ -1.7
H3BM21 AL590004.2-201ENST00000404787 371 ntBASIC4.44□□□□□ -1.7
H3BM21 RPL23AP48-201ENST00000406913 488 ntBASIC4.44□□□□□ -1.7
H3BM21 RNA5SP31-201ENST00000411144 127 ntBASIC4.44□□□□□ -1.7
H3BM21 AC004975.1-201ENST00000428733 208 ntBASIC4.44□□□□□ -1.7
H3BM21 RPS29P17-201ENST00000430795 166 ntBASIC4.44□□□□□ -1.7
H3BM21 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.44□□□□□ -1.7
H3BM21 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.44□□□□□ -1.7
H3BM21 GNRHR2P1-201ENST00000555315 631 ntBASIC4.44□□□□□ -1.7
H3BM21 ARF4P1-201ENST00000605447 541 ntBASIC4.44□□□□□ -1.7
H3BM21 Y_RNA.818-201ENST00000618813 71 ntBASIC4.44□□□□□ -1.7
H3BM21 AL035470.1-201ENST00000622571 220 ntBASIC4.44□□□□□ -1.7
H3BM21 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.44□□□□□ -1.7
H3BM21 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.44□□□□□ -1.7
H3BM21 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
H3BM21 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.44□□□□□ -1.7
H3BM21 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
H3BM21 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
H3BM21 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
H3BM21 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.43□□□□□ -1.7
H3BM21 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
H3BM21 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
H3BM21 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
H3BM21 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
H3BM21 RNU1-62P-201ENST00000362599 164 ntBASIC4.43□□□□□ -1.7
H3BM21 RNU6-799P-201ENST00000363567 107 ntBASIC4.43□□□□□ -1.7
H3BM21 RN7SL98P-201ENST00000462271 300 ntBASIC4.43□□□□□ -1.7
H3BM21 RPS20P22-201ENST00000473700 357 ntBASIC4.43□□□□□ -1.7
H3BM21 AC022137.1-201ENST00000483735 151 ntBASIC4.43□□□□□ -1.7
H3BM21 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.43□□□□□ -1.7
H3BM21 AC021231.3-201ENST00000558497 370 ntBASIC4.43□□□□□ -1.7
H3BM21 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.43□□□□□ -1.7
H3BM21 AC114781.5-201ENST00000615297 108 ntBASIC4.43□□□□□ -1.7
H3BM21 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
H3BM21 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
H3BM21 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
H3BM21 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
H3BM21 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.43□□□□□ -1.7
H3BM21 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
H3BM21 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
H3BM21 CPHL1P-201ENST00000461341 3407 ntBASIC4.43□□□□□ -1.7
H3BM21 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
H3BM21 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H3BM21 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
H3BM21 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H3BM21 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H3BM21 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
H3BM21 SNORA63.5-201ENST00000363548 123 ntBASIC4.42□□□□□ -1.7
H3BM21 RNU6-1125P-201ENST00000363601 107 ntBASIC4.42□□□□□ -1.7
H3BM21 RNU6-1080P-201ENST00000383982 107 ntBASIC4.42□□□□□ -1.7
H3BM21 SNORA70C-201ENST00000384538 135 ntBASIC4.42□□□□□ -1.7
H3BM21 SNORA48.5-201ENST00000391143 135 ntBASIC4.42□□□□□ -1.7
H3BM21 Z85995.1-201ENST00000415547 335 ntBASIC4.42□□□□□ -1.7
H3BM21 CKS1BP5-201ENST00000434172 273 ntBASIC4.42□□□□□ -1.7
H3BM21 RPL39P39-201ENST00000455840 151 ntBASIC4.42□□□□□ -1.7
H3BM21 AC007215.1-201ENST00000464893 276 ntBASIC4.42□□□□□ -1.7
H3BM21 AC090515.1-201ENST00000465295 476 ntBASIC4.42□□□□□ -1.7
H3BM21 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.42□□□□□ -1.7
H3BM21 MIR2116-201ENST00000517221 80 ntBASIC4.42□□□□□ -1.7
H3BM21 AC091905.2-201ENST00000623143 306 ntBASIC4.42□□□□□ -1.7
H3BM21 AC068724.3-201ENST00000625906 87 ntBASIC4.42□□□□□ -1.7
H3BM21 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.42□□□□□ -1.7
H3BM21 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
H3BM21 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.42□□□□□ -1.7
H3BM21 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.42□□□□□ -1.7
H3BM21 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
H3BM21 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.41□□□□□ -1.7
H3BM21 AL133383.2-201ENST00000622958 2336 ntBASIC4.41□□□□□ -1.7
H3BM21 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
H3BM21 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.41□□□□□ -1.7
H3BM21 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
H3BM21 RNU6-1141P-201ENST00000364520 107 ntBASIC4.41□□□□□ -1.7
H3BM21 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.41□□□□□ -1.7
H3BM21 Y_RNA.415-201ENST00000384012 112 ntBASIC4.41□□□□□ -1.7
H3BM21 SNORA18.3-201ENST00000384122 132 ntBASIC4.41□□□□□ -1.7
H3BM21 MIR1278-201ENST00000408753 81 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms