Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 AL603914.1-201ENST00000401964 204 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 MIR1278-201ENST00000408753 81 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 RNA5SP504-201ENST00000410676 117 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 RNY4P29-201ENST00000410801 97 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 CYCSP48-201ENST00000417124 323 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 RPS12P10-201ENST00000427031 377 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 RPS27AP10-201ENST00000496103 208 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 RN7SKP19-201ENST00000516016 252 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 RNU7-115P-201ENST00000516433 55 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 RNU1-117P-201ENST00000517041 158 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 AC091178.2-201ENST00000584401 117 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 AC131055.1-201ENST00000584626 316 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 MIR92B-201ENST00000607575 96 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 MIR6716-201ENST00000613413 80 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 PCGEM1.1-201ENST00000613431 131 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 AC005562.2-201ENST00000618264 111 ntBASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCUBE3Q8IX30 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 A2MP1-204ENST00000566278 4130 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 Y_RNA.388-201ENST00000383919 113 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 RNU6-136P-201ENST00000384663 107 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 SNORA68.2-201ENST00000391263 128 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 AL591419.1-201ENST00000427423 339 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 AC027124.2-201ENST00000428249 105 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 HMGN2P10-201ENST00000448085 265 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 NDUFS5P3-201ENST00000450668 321 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 RN7SL132P-201ENST00000478131 296 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 RNA5SP446-201ENST00000515955 82 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 RNA5SP464-201ENST00000516251 108 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 RNU6-197P-201ENST00000516680 100 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 AC099778.2-201ENST00000610904 211 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 MAPK10-304ENST00000641341 3984 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 OR51H2P-202ENST00000641424 3046 ntBASIC4.78□□□□□ -1.64
SCUBE3Q8IX30 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
SCUBE3Q8IX30 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 AL513302.2-201ENST00000562313 1842 ntBASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 RNU6-978P-201ENST00000364371 103 ntBASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 AP002088.1-201ENST00000382740 395 ntBASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 RNU6-106P-201ENST00000384405 107 ntBASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 SDHCP2-201ENST00000398565 501 ntBASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 MIR1271-201ENST00000408537 86 ntBASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 AL162591.2-201ENST00000449634 317 ntBASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 RNU6-781P-201ENST00000516377 101 ntBASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 IGKV2D-19-201ENST00000523346 262 ntBASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 MIR5006-201ENST00000583027 110 ntBASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SCUBE3Q8IX30 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 SNORD114-19-201ENST00000363072 75 ntBASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 RNU6-1080P-201ENST00000383982 107 ntBASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 RNU6-905P-201ENST00000384434 107 ntBASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 MIRLET7F2-201ENST00000385277 83 ntBASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 Y_RNA.587-201ENST00000391210 103 ntBASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 MIR921-201ENST00000401133 56 ntBASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 RNU2-55P-201ENST00000411146 174 ntBASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 AL139281.1-201ENST00000422120 335 ntBASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 RPEP3-201ENST00000425462 676 ntBASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 RPL23AP1-201ENST00000428990 471 ntBASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.76□□□□□ -1.65
SCUBE3Q8IX30 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms