Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 MTND1P18-201ENST00000448191 573 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 AC009646.1-201ENST00000510455 318 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-377P-201ENST00000515965 102 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 RNU5F-2P-201ENST00000516066 82 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 AP001893.2-201ENST00000526949 202 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 DUXAP5-201ENST00000529668 529 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 AC023050.3-201ENST00000541142 333 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 NIFKP6-201ENST00000598115 845 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 AC009161.2-201ENST00000624626 138 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 MIR1248-201ENST00000629190 106 ntBASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
NUDCD3Q8IVD9 RNU6-1164P-201ENST00000364428 107 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 MIR597-201ENST00000384968 97 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 SNORD70.1-201ENST00000391007 85 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 RNU2-9P-201ENST00000410194 145 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AC092447.3-201ENST00000426027 686 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AC243964.1-201ENST00000441814 261 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 PRPS1P1-201ENST00000445305 876 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 MTND1P27-201ENST00000451117 902 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 RPS27AP8-201ENST00000452665 445 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 C1DP4-201ENST00000455429 424 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AC022364.2-201ENST00000457963 554 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 RNA5SP182-201ENST00000516064 82 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AP005660.1-201ENST00000522972 293 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AP002963.1-201ENST00000530590 184 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 GNAI2P1-201ENST00000541815 315 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AC022254.1-201ENST00000567857 235 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AC040904.1-201ENST00000590850 223 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 BNIP3P25-201ENST00000596023 559 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AC103810.8-201ENST00000607347 118 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AC068944.2-201ENST00000610373 403 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AC099842.1-201ENST00000619919 596 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AC022418.1-201ENST00000624118 445 ntBASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.65□□□□□ -2.15
NUDCD3Q8IVD9 RNU6-428P-201ENST00000362942 107 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 RNU6-1285P-201ENST00000363480 105 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 RNU6-393P-201ENST00000384475 107 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 RNU6-1127P-201ENST00000384580 107 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 SNORA16.2-201ENST00000390991 127 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 RNA5SP465-201ENST00000391195 109 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 RNU4-26P-201ENST00000410270 107 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 RNU6-1245P-201ENST00000411130 106 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 RN7SKP142-201ENST00000411236 328 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 RNU6-293P-201ENST00000411259 106 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 SRIP3-201ENST00000413200 219 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 MTCO2P34-201ENST00000421994 607 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 AL358934.1-201ENST00000432346 324 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 MTND2P29-201ENST00000438595 412 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 AC245102.2-201ENST00000448956 180 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 RNU1-98P-201ENST00000458992 160 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 AC087884.1-201ENST00000469738 328 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 LRRC34P2-201ENST00000514850 553 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 RNU2-69P-201ENST00000516061 100 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 SUB1P2-201ENST00000556401 297 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 DEFB122-202ENST00000569013 197 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 uc_338.11-201ENST00000619132 160 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 SRP54-214ENST00000630962 162 ntTSL 5 BASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 AL390237.1-201ENST00000404226 1415 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 ATP8A2P2-201ENST00000437678 1568 ntBASIC1.64□□□□□ -2.15
NUDCD3Q8IVD9 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 RNU6-336P-201ENST00000364891 107 ntBASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 RNU6-692P-201ENST00000384496 107 ntBASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 RNU11-3P-201ENST00000391111 133 ntBASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 RNA5SP212-201ENST00000391223 107 ntBASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 AL049545.1-201ENST00000401856 572 ntBASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 AL590556.1-201ENST00000423231 483 ntBASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 CBX3P6-201ENST00000430257 527 ntBASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 SNRPGP7-201ENST00000469016 106 ntBASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 AC093259.1-201ENST00000509755 300 ntBASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 RNU6-991P-201ENST00000516168 107 ntBASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 AC115990.1-201ENST00000526957 301 ntBASIC1.63□□□□□ -2.15
NUDCD3Q8IVD9 AL356057.1-201ENST00000533798 831 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms