Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC12P31275 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC12P31275 FAM35DP-201ENST00000323387 2712 ntBASIC3.61□□□□□ -1.83
HOXC12P31275 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC12P31275 RNA5SP119-201ENST00000362715 117 ntBASIC3.61□□□□□ -1.83
HOXC12P31275 SNORD113-8-201ENST00000363497 74 ntBASIC3.61□□□□□ -1.83
HOXC12P31275 RNU6-137P-201ENST00000363680 108 ntBASIC3.61□□□□□ -1.83
HOXC12P31275 Y_RNA.237-201ENST00000364439 102 ntBASIC3.61□□□□□ -1.83
HOXC12P31275 MIR147B-201ENST00000390185 80 ntBASIC3.61□□□□□ -1.83
HOXC12P31275 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC12P31275 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.61□□□□□ -1.83
HOXC12P31275 AP000705.1-201ENST00000454567 350 ntBASIC3.61□□□□□ -1.83
HOXC12P31275 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC12P31275 PPBPP1-201ENST00000510807 373 ntBASIC3.61□□□□□ -1.83
HOXC12P31275 SCARNA13-201ENST00000516672 275 ntBASIC3.61□□□□□ -1.83
HOXC12P31275 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC12P31275 CYP4A43P-201ENST00000568156 121 ntBASIC3.61□□□□□ -1.83
HOXC12P31275 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.61□□□□□ -1.83
HOXC12P31275 MIR5684-201ENST00000585074 65 ntBASIC3.61□□□□□ -1.83
HOXC12P31275 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC12P31275 AL606490.9-201ENST00000603331 271 ntBASIC3.61□□□□□ -1.83
HOXC12P31275 AL078605.1-201ENST00000603529 500 ntBASIC3.61□□□□□ -1.83
HOXC12P31275 BRDTP1-201ENST00000605735 677 ntBASIC3.61□□□□□ -1.83
HOXC12P31275 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.61□□□□□ -1.83
HOXC12P31275 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
HOXC12P31275 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.61□□□□□ -1.83
HOXC12P31275 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.61□□□□□ -1.83
HOXC12P31275 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HOXC12P31275 MAPK10-362ENST00000641864 4484 ntBASIC3.6□□□□□ -1.83
HOXC12P31275 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC12P31275 SNORD74.4-201ENST00000364129 80 ntBASIC3.6□□□□□ -1.83
HOXC12P31275 Y_RNA.518-201ENST00000384552 113 ntBASIC3.6□□□□□ -1.83
HOXC12P31275 U3.19-201ENST00000390893 196 ntBASIC3.6□□□□□ -1.83
HOXC12P31275 MRPL35P1-201ENST00000404272 572 ntBASIC3.6□□□□□ -1.83
HOXC12P31275 MIR1251-201ENST00000408552 70 ntBASIC3.6□□□□□ -1.83
HOXC12P31275 AL031183.1-201ENST00000457667 207 ntBASIC3.6□□□□□ -1.83
HOXC12P31275 RPL7P49-201ENST00000471402 708 ntBASIC3.6□□□□□ -1.83
HOXC12P31275 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.6□□□□□ -1.83
HOXC12P31275 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.6□□□□□ -1.83
HOXC12P31275 MDM2-232ENST00000544561 213 ntTSL 5 BASIC3.6□□□□□ -1.83
HOXC12P31275 AC141273.2-201ENST00000618989 130 ntBASIC3.6□□□□□ -1.83
HOXC12P31275 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
HOXC12P31275 AC091953.5-201ENST00000622919 233 ntBASIC3.6□□□□□ -1.83
HOXC12P31275 AC103988.1-201ENST00000566382 2177 ntBASIC3.6□□□□□ -1.83
HOXC12P31275 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
HOXC12P31275 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HOXC12P31275 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
HOXC12P31275 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXC12P31275 AC010680.1-201ENST00000590024 3590 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 SNORA9-201ENST00000384215 133 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 Y_RNA.478-201ENST00000384358 107 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 MIR483-201ENST00000385070 76 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 RNU6-750P-201ENST00000390946 107 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 SNORA26.3-201ENST00000391119 136 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 RNU6-1077P-201ENST00000410506 102 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 RNU6-1001P-201ENST00000411265 100 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 AC093578.1-201ENST00000415219 368 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 AC139712.2-201ENST00000424302 339 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 AL691449.1-201ENST00000426570 421 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 AC004383.1-201ENST00000438135 289 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 AC006011.1-201ENST00000442758 349 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.59□□□□□ -1.83
HOXC12P31275 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXC12P31275 AIG1P1-201ENST00000503376 148 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 HMGB3P17-201ENST00000504195 649 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXC12P31275 SNORA31.1-201ENST00000515993 133 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 SNORA31.5-201ENST00000516190 133 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 RN7SKP49-201ENST00000516675 260 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 RNU6-567P-201ENST00000516746 107 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXC12P31275 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXC12P31275 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.59□□□□□ -1.83
HOXC12P31275 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXC12P31275 RPS15AP11-201ENST00000594193 385 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXC12P31275 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 SNORD98-201ENST00000636377 67 ntBASIC3.59□□□□□ -1.83
HOXC12P31275 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXC12P31275 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
HOXC12P31275 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HOXC12P31275 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
HOXC12P31275 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.59□□□□□ -1.84
HOXC12P31275 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC12P31275 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC12P31275 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC12P31275 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC12P31275 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXC12P31275 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXC12P31275 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
HOXC12P31275 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HOXC12P31275 MIR335-201ENST00000362173 94 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 RNU6-529P-201ENST00000363383 104 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 SNORD115-8-201ENST00000363856 82 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 SNORD27-201ENST00000363981 72 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 SNORD115-38-201ENST00000365037 82 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 RNU6-1026P-201ENST00000384465 108 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 Y_RNA.515-201ENST00000384535 112 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 MIR548H3-201ENST00000408771 118 ntBASIC3.58□□□□□ -1.84
HOXC12P31275 RHEBP3-201ENST00000411920 351 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 145.1 ms