Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 AC022655.2-201ENST00000577280 318 ntBASIC4.81□□□□□ -1.64
ALDH1A1P00352 MIR5688-201ENST00000580619 83 ntBASIC4.81□□□□□ -1.64
ALDH1A1P00352 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
ALDH1A1P00352 AC007546.2-201ENST00000623996 360 ntBASIC4.81□□□□□ -1.64
ALDH1A1P00352 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ALDH1A1P00352 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ALDH1A1P00352 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ALDH1A1P00352 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ALDH1A1P00352 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
ALDH1A1P00352 SNORA60-201ENST00000362396 134 ntBASIC4.8□□□□□ -1.64
ALDH1A1P00352 RNU6-1164P-201ENST00000364428 107 ntBASIC4.8□□□□□ -1.64
ALDH1A1P00352 RNU6-1141P-201ENST00000364520 107 ntBASIC4.8□□□□□ -1.64
ALDH1A1P00352 NDUFB4P4-201ENST00000404822 243 ntBASIC4.8□□□□□ -1.64
ALDH1A1P00352 AL606845.1-201ENST00000404881 255 ntBASIC4.8□□□□□ -1.64
ALDH1A1P00352 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ALDH1A1P00352 RN7SKP177-201ENST00000410567 355 ntBASIC4.8□□□□□ -1.64
ALDH1A1P00352 HSPE1P12-201ENST00000412576 301 ntBASIC4.8□□□□□ -1.64
ALDH1A1P00352 RNU6-1183P-201ENST00000517054 60 ntBASIC4.8□□□□□ -1.64
ALDH1A1P00352 AC006064.5-201ENST00000541782 248 ntBASIC4.8□□□□□ -1.64
ALDH1A1P00352 AL161713.1-201ENST00000555538 145 ntBASIC4.8□□□□□ -1.64
ALDH1A1P00352 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.8□□□□□ -1.64
ALDH1A1P00352 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ALDH1A1P00352 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ALDH1A1P00352 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
ALDH1A1P00352 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ALDH1A1P00352 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ALDH1A1P00352 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ALDH1A1P00352 AC073073.2-201ENST00000609827 2578 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ALDH1A1P00352 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.79□□□□□ -1.64
ALDH1A1P00352 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
ALDH1A1P00352 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ALDH1A1P00352 RNU1-83P-201ENST00000363426 164 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 RNU6-454P-201ENST00000364292 107 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 Y_RNA.229-201ENST00000364347 113 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 RNU6-1082P-201ENST00000364574 107 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 SNORA5A-201ENST00000384111 134 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 AL592291.1-201ENST00000403830 352 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 AL591034.1-201ENST00000407447 340 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.79□□□□□ -1.64
ALDH1A1P00352 AL158147.1-201ENST00000443970 75 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 AL031737.1-201ENST00000450125 223 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 SNORA59A-201ENST00000459326 152 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 AC007215.1-201ENST00000464893 276 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 RPL23AP14-201ENST00000468281 468 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 SNRPGP7-201ENST00000469016 106 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 RPL23AP70-201ENST00000483361 460 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.79□□□□□ -1.64
ALDH1A1P00352 RNU6-703P-201ENST00000516946 107 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 RNU6-537P-201ENST00000517277 103 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.79□□□□□ -1.64
ALDH1A1P00352 LINC00933-203ENST00000559812 219 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.79□□□□□ -1.64
ALDH1A1P00352 MIR3921-201ENST00000577308 85 ntBASIC4.79□□□□□ -1.64
ALDH1A1P00352 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.79□□□□□ -1.64
ALDH1A1P00352 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
ALDH1A1P00352 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ALDH1A1P00352 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.79□□□□□ -1.64
ALDH1A1P00352 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
ALDH1A1P00352 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
ALDH1A1P00352 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ALDH1A1P00352 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.78□□□□□ -1.64
ALDH1A1P00352 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ALDH1A1P00352 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.78□□□□□ -1.64
ALDH1A1P00352 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
ALDH1A1P00352 SNORD56.1-201ENST00000362913 68 ntBASIC4.78□□□□□ -1.64
ALDH1A1P00352 RNU6-799P-201ENST00000363567 107 ntBASIC4.78□□□□□ -1.64
ALDH1A1P00352 RNU6-728P-201ENST00000365375 104 ntBASIC4.78□□□□□ -1.64
ALDH1A1P00352 Y_RNA.388-201ENST00000383919 113 ntBASIC4.78□□□□□ -1.64
ALDH1A1P00352 Y_RNA.584-201ENST00000391090 114 ntBASIC4.78□□□□□ -1.64
ALDH1A1P00352 MIR921-201ENST00000401133 56 ntBASIC4.78□□□□□ -1.64
ALDH1A1P00352 RNY4P29-201ENST00000410801 97 ntBASIC4.78□□□□□ -1.64
ALDH1A1P00352 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ALDH1A1P00352 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ALDH1A1P00352 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC4.78□□□□□ -1.64
ALDH1A1P00352 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.78□□□□□ -1.64
ALDH1A1P00352 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.78□□□□□ -1.64
ALDH1A1P00352 AC021231.3-201ENST00000558497 370 ntBASIC4.78□□□□□ -1.64
ALDH1A1P00352 MIR5195-201ENST00000583555 115 ntBASIC4.78□□□□□ -1.64
ALDH1A1P00352 AC136601.2-201ENST00000604356 474 ntBASIC4.78□□□□□ -1.64
ALDH1A1P00352 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ALDH1A1P00352 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.78□□□□□ -1.64
ALDH1A1P00352 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ALDH1A1P00352 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
ALDH1A1P00352 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.78□□□□□ -1.64
ALDH1A1P00352 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ALDH1A1P00352 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms