Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 AL356387.2-201ENST00000422272 243 ntBASIC7.44□□□□□ -1.22
MSH5O43196 RPS12P17-201ENST00000438591 377 ntBASIC7.44□□□□□ -1.22
MSH5O43196 PPIAP21-201ENST00000464473 501 ntBASIC7.44□□□□□ -1.22
MSH5O43196 AL023881.1-201ENST00000621088 301 ntBASIC7.44□□□□□ -1.22
MSH5O43196 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
MSH5O43196 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
MSH5O43196 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
MSH5O43196 AC144833.1-201ENST00000567953 4089 ntBASIC7.43□□□□□ -1.22
MSH5O43196 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
MSH5O43196 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC7.43□□□□□ -1.22
MSH5O43196 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC7.43□□□□□ -1.22
MSH5O43196 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC7.43□□□□□ -1.22
MSH5O43196 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
MSH5O43196 SNORA32-201ENST00000384072 121 ntBASIC7.43□□□□□ -1.22
MSH5O43196 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
MSH5O43196 RNU6-1319P-201ENST00000390855 104 ntBASIC7.43□□□□□ -1.22
MSH5O43196 RNU6-747P-201ENST00000390928 104 ntBASIC7.43□□□□□ -1.22
MSH5O43196 SNORD77.2-201ENST00000391045 68 ntBASIC7.43□□□□□ -1.22
MSH5O43196 RNU6-241P-201ENST00000391148 104 ntBASIC7.43□□□□□ -1.22
MSH5O43196 AC016909.1-201ENST00000415916 166 ntBASIC7.43□□□□□ -1.22
MSH5O43196 AC096996.1-201ENST00000563813 325 ntBASIC7.43□□□□□ -1.22
MSH5O43196 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
MSH5O43196 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC7.43□□□□□ -1.22
MSH5O43196 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
MSH5O43196 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
MSH5O43196 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MSH5O43196 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MSH5O43196 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MSH5O43196 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
MSH5O43196 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MSH5O43196 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.42□□□□□ -1.22
MSH5O43196 snoU2_19.1-201ENST00000362361 80 ntBASIC7.42□□□□□ -1.22
MSH5O43196 RNA5SP235-201ENST00000365411 114 ntBASIC7.42□□□□□ -1.22
MSH5O43196 RNU6-895P-201ENST00000384125 103 ntBASIC7.42□□□□□ -1.22
MSH5O43196 MIR765-201ENST00000390226 114 ntBASIC7.42□□□□□ -1.22
MSH5O43196 RNU4-88P-201ENST00000411220 86 ntBASIC7.42□□□□□ -1.22
MSH5O43196 RN7SL97P-201ENST00000486780 299 ntBASIC7.42□□□□□ -1.22
MSH5O43196 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC7.42□□□□□ -1.22
MSH5O43196 MIR6810-201ENST00000622701 70 ntBASIC7.42□□□□□ -1.22
MSH5O43196 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MSH5O43196 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MSH5O43196 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
MSH5O43196 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MSH5O43196 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
MSH5O43196 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.41□□□□□ -1.22
MSH5O43196 U8.4-201ENST00000363626 134 ntBASIC7.41□□□□□ -1.22
MSH5O43196 AC023141.8-201ENST00000442554 208 ntBASIC7.41□□□□□ -1.22
MSH5O43196 AC021739.1-201ENST00000559631 174 ntBASIC7.41□□□□□ -1.22
MSH5O43196 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC7.41□□□□□ -1.22
MSH5O43196 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC7.41□□□□□ -1.22
MSH5O43196 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
MSH5O43196 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
MSH5O43196 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC7.4□□□□□ -1.22
MSH5O43196 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
MSH5O43196 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
MSH5O43196 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC7.4□□□□□ -1.22
MSH5O43196 RNU6-480P-201ENST00000384332 107 ntBASIC7.4□□□□□ -1.22
MSH5O43196 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC7.4□□□□□ -1.22
MSH5O43196 RPL7AP49-201ENST00000429522 581 ntBASIC7.4□□□□□ -1.22
MSH5O43196 AL591438.1-201ENST00000433508 581 ntBASIC7.4□□□□□ -1.22
MSH5O43196 AC087499.4-201ENST00000448505 178 ntBASIC7.4□□□□□ -1.22
MSH5O43196 RNU7-14P-201ENST00000459331 62 ntBASIC7.4□□□□□ -1.22
MSH5O43196 RN7SL222P-201ENST00000476452 299 ntBASIC7.4□□□□□ -1.22
MSH5O43196 RPS21P4-201ENST00000487122 248 ntBASIC7.4□□□□□ -1.22
MSH5O43196 IGLVIV-65-201ENST00000517313 360 ntBASIC7.4□□□□□ -1.22
MSH5O43196 AC021678.3-201ENST00000517893 476 ntBASIC7.4□□□□□ -1.22
MSH5O43196 MRPS21P7-201ENST00000566937 238 ntBASIC7.4□□□□□ -1.22
MSH5O43196 MIR4646-201ENST00000580775 63 ntBASIC7.4□□□□□ -1.22
MSH5O43196 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC7.4□□□□□ -1.22
MSH5O43196 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.4□□□□□ -1.23
MSH5O43196 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
MSH5O43196 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MSH5O43196 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
MSH5O43196 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MSH5O43196 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
MSH5O43196 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
MSH5O43196 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC7.39□□□□□ -1.23
MSH5O43196 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.39□□□□□ -1.23
MSH5O43196 SNORA70.6-201ENST00000383934 134 ntBASIC7.39□□□□□ -1.23
MSH5O43196 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
MSH5O43196 AC006466.1-201ENST00000438721 289 ntBASIC7.39□□□□□ -1.23
MSH5O43196 RN7SL352P-201ENST00000466002 277 ntBASIC7.39□□□□□ -1.23
MSH5O43196 AC069200.1-201ENST00000609511 323 ntBASIC7.39□□□□□ -1.23
MSH5O43196 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
MSH5O43196 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
MSH5O43196 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
MSH5O43196 ICE2P2-201ENST00000483823 2787 ntBASIC7.39□□□□□ -1.23
MSH5O43196 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC7.39□□□□□ -1.23
MSH5O43196 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
MSH5O43196 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
MSH5O43196 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
MSH5O43196 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
MSH5O43196 RNU6-1079P-201ENST00000362861 110 ntBASIC7.38□□□□□ -1.23
MSH5O43196 Y_RNA.173-201ENST00000363776 113 ntBASIC7.38□□□□□ -1.23
MSH5O43196 RNU6-268P-201ENST00000364174 107 ntBASIC7.38□□□□□ -1.23
MSH5O43196 RNU6-442P-201ENST00000383968 104 ntBASIC7.38□□□□□ -1.23
MSH5O43196 AL590139.1-201ENST00000416267 400 ntBASIC7.38□□□□□ -1.23
MSH5O43196 AC099336.2-201ENST00000422457 254 ntBASIC7.38□□□□□ -1.23
MSH5O43196 AC099560.2-201ENST00000457554 255 ntBASIC7.38□□□□□ -1.23
MSH5O43196 RPS29P20-201ENST00000489592 171 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms