Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 MAPK10-253ENST00000641010 4072 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 AL159152.1-201ENST00000635019 2587 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 Y_RNA.172-201ENST00000363765 102 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 RNA5SP485-201ENST00000365053 119 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 AC068538.1-201ENST00000376856 336 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 SNORD21-201ENST00000383953 95 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 SNORD14D-201ENST00000384390 87 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 MIR518C-201ENST00000384822 101 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 MIR569-201ENST00000385228 96 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 Y_RNA.586-201ENST00000391146 98 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 RN7SKP220-201ENST00000410611 288 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 RNU2-51P-201ENST00000410708 197 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 AC007161.1-204ENST00000423039 460 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 CKS1BP6-201ENST00000424932 240 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 AL121914.1-201ENST00000450188 156 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 AC010598.1-201ENST00000510378 103 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 RNU6-586P-201ENST00000517265 104 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 AC010287.1-201ENST00000566916 357 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 MIR548AY-201ENST00000617669 107 ntBASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TMEM238LA0A1B0GVL6 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 AC138915.1-201ENST00000565427 1685 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 SNORA27.1-201ENST00000362604 124 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 RNA5SP322-201ENST00000363617 119 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 RNU1-65P-201ENST00000363919 148 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 SNORD31B-201ENST00000364977 69 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 Y_RNA.337-201ENST00000365312 102 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 SNORA30B-201ENST00000365319 129 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 RNU6-975P-201ENST00000384296 105 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 SDHDP6-201ENST00000414693 480 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 DNAJC19P7-201ENST00000428811 344 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 AC092754.1-201ENST00000472975 479 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 AC010409.1-201ENST00000487382 476 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 AC117454.1-201ENST00000491120 168 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 RNU7-115P-201ENST00000516433 55 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 RNU6-1337P-201ENST00000516525 95 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 RN7SL703P-201ENST00000578485 302 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 DNAJC19P2-201ENST00000593340 302 ntBASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
TMEM238LA0A1B0GVL6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.53□□□□□ -1.85
TMEM238LA0A1B0GVL6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 AC010894.1-201ENST00000313760 361 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 Y_RNA.229-201ENST00000364347 113 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 RNA5SP30-201ENST00000365552 115 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 SNORA36B-201ENST00000410438 131 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 RNU6-57P-201ENST00000411348 103 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 TRBV29OR9-2-201ENST00000427589 333 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 COX6CP13-201ENST00000428703 226 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 AC009238.2-201ENST00000431026 355 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 CEACAMP7-201ENST00000444105 496 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 AL137159.1-201ENST00000452808 512 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 SNORD65B-201ENST00000459126 73 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 RNU6-221P-201ENST00000459541 99 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 RN7SL456P-201ENST00000469290 295 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 RPS26P28-201ENST00000470806 348 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 RN7SL70P-201ENST00000478322 302 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 RNU6-479P-201ENST00000516348 105 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
TMEM238LA0A1B0GVL6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TMEM238LA0A1B0GVL6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
TMEM238LA0A1B0GVL6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TMEM238LA0A1B0GVL6 ODF3-202ENST00000342593 386 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms