Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 MIR448-201ENST00000362131 111 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 Y_RNA.243-201ENST00000364481 109 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 RNU6-1279P-201ENST00000383917 103 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 U1.1-201ENST00000384101 164 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 AC005300.1-201ENST00000428401 373 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 AC016831.4-201ENST00000438302 307 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 AL353748.1-201ENST00000440753 474 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 RNU7-197P-201ENST00000458836 62 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 AC005921.1-201ENST00000510589 286 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 EIF4A1P12-201ENST00000551910 141 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 MIR4284-201ENST00000578924 81 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 PCGEM1.1-201ENST00000613431 131 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 ZNF137P-201ENST00000456718 1920 ntBASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 U3.9-201ENST00000363823 204 ntBASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 RNU6-270P-201ENST00000364131 105 ntBASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 RNU6-19P-201ENST00000384718 107 ntBASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 RNU6-460P-201ENST00000391158 108 ntBASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 AL606845.1-201ENST00000404881 255 ntBASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 SCARNA10-201ENST00000459255 330 ntBASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 RPL21P126-201ENST00000470049 478 ntBASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 SRIP1-201ENST00000489235 288 ntBASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 CYCTP-201ENST00000504253 315 ntBASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 RNA5SP76-201ENST00000516277 87 ntBASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 MIR4277-201ENST00000578298 84 ntBASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HRH3Q9Y5N1 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
HRH3Q9Y5N1 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
HRH3Q9Y5N1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 RNA5SP167-201ENST00000365461 116 ntBASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 RNA5SP372-201ENST00000390836 115 ntBASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 HDGFP1-201ENST00000405943 252 ntBASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 CRYBB2P1-203ENST00000415709 538 ntBASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 AL139281.1-201ENST00000422120 335 ntBASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 RNU7-141P-201ENST00000459304 62 ntBASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 AC092991.1-201ENST00000477176 376 ntBASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 RNU1-6P-201ENST00000516290 144 ntBASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 AC091979.2-201ENST00000607514 214 ntBASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 AL445567.2-201ENST00000618935 498 ntBASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
HRH3Q9Y5N1 AL672167.1-203ENST00000641299 2975 ntBASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 Y_RNA.229-201ENST00000364347 113 ntBASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 Y_RNA.393-201ENST00000383936 102 ntBASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 RNU6-476P-201ENST00000384726 107 ntBASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 MIR129-1-201ENST00000384972 72 ntBASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 RPL23AP48-201ENST00000406913 488 ntBASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 NDUFS5P3-201ENST00000450668 321 ntBASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 RNU6-91P-201ENST00000607774 107 ntBASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.26□□□□□ -1.73
HRH3Q9Y5N1 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 USP8P1-201ENST00000494673 3183 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 AC021146.4-201ENST00000309229 279 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 RNA5SP502-201ENST00000362694 119 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 SNORA63.4-201ENST00000362763 126 ntBASIC4.25□□□□□ -1.73
HRH3Q9Y5N1 U3.8-201ENST00000363675 217 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms