Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC104435.1-201ENST00000483483 166 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 AC140059.1-201ENST00000489238 361 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 Y_RNA.655-201ENST00000515919 96 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 AC069113.1-201ENST00000517763 267 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 MIR4648-201ENST00000580107 72 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 AC090897.2-201ENST00000581715 130 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 MIR4658-201ENST00000584344 65 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 AC025165.5-201ENST00000602802 578 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 HMGB1P24-202ENST00000615653 685 ntBASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
C9orf40Q8IXQ3 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 RNA5SP125-201ENST00000364843 120 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 RNU4-66P-201ENST00000365199 138 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 RNU1-57P-201ENST00000384491 166 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 RNA5SP219-201ENST00000390940 113 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 SNORD56-201ENST00000413522 71 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 OOSP1P1-201ENST00000423265 274 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AL591043.1-201ENST00000432461 424 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 MTND3P21-201ENST00000433774 331 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AC090515.1-201ENST00000465295 476 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AC090255.1-201ENST00000495779 349 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-377P-201ENST00000515965 102 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-720P-201ENST00000516363 108 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-1038P-201ENST00000516516 104 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 Y_RNA.704-201ENST00000516851 102 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AC109479.2-201ENST00000517842 174 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AC109329.1-201ENST00000518744 317 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AC090115.3-201ENST00000553218 849 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 HMGB1P33-201ENST00000563485 527 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 EIF1P4-201ENST00000572664 335 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AC073410.2-201ENST00000603240 332 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 APOOP1-201ENST00000604695 592 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 AF250324.2-201ENST00000608299 610 ntBASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.95□□□□□ -2.1
C9orf40Q8IXQ3 Y_RNA.3-201ENST00000362331 103 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-38P-201ENST00000384085 107 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-483P-201ENST00000384088 108 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 AL590002.1-201ENST00000406554 418 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-648P-201ENST00000410190 107 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 CYCSP48-201ENST00000417124 323 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 AC003685.2-201ENST00000422795 395 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 AC011753.1-201ENST00000451001 220 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 TPTE2P5-203ENST00000458118 728 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-333P-201ENST00000459117 107 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 AC091435.1-201ENST00000505442 584 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 AC008526.1-201ENST00000509149 338 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-1281P-201ENST00000516223 105 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 CENPUP1-201ENST00000526649 1202 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 AK6P1-201ENST00000540219 478 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 OR11H5P-201ENST00000554039 926 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 PSMA3P-201ENST00000555485 635 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 AL138976.2-201ENST00000563989 694 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 MIR5002-201ENST00000584713 97 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 VN1R80P-201ENST00000597126 338 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 uc_338.15-201ENST00000615470 191 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 AC005858.4-201ENST00000623191 700 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 AC097372.5-201ENST00000623665 376 ntBASIC1.94□□□□□ -2.1
C9orf40Q8IXQ3 RNU1-72P-201ENST00000362976 153 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 RNU6-105P-201ENST00000363909 104 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 SNORA38-201ENST00000363946 132 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 RNU4-20P-201ENST00000365601 151 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 MIR186-201ENST00000384988 86 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 RNU2-23P-201ENST00000410545 195 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 HMGN2P38-201ENST00000423806 265 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 AC008267.5-201ENST00000424928 265 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 SEPT14P3-201ENST00000439401 183 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 AL732372.2-207ENST00000445840 183 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 MTND3P16-201ENST00000452205 344 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 SEPT14P2-201ENST00000453405 183 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 AC087884.1-201ENST00000469738 328 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 RPL30P12-201ENST00000474666 353 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 CKS1BP2-201ENST00000497342 240 ntBASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.93□□□□□ -2.1
C9orf40Q8IXQ3 SEPT14P4-201ENST00000513445 186 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms