Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 OR14L1P-202ENST00000641545 3009 ntBASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.83□□□□□ -1.64
SCUBE3Q8IX30 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 RN7SKP280-201ENST00000364196 304 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 RNU6-647P-201ENST00000364243 107 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 U8.6-201ENST00000364939 135 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 SNORA36B-201ENST00000410438 131 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 AL365496.1-201ENST00000426885 215 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 RPL30P5-201ENST00000494923 336 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 AP001781.1-201ENST00000530977 207 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 AC027176.1-201ENST00000560204 514 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 AC025281.1-201ENST00000567026 265 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 MIR4715-201ENST00000584117 79 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 AL356218.2-201ENST00000605264 187 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 uc_338.28-201ENST00000612082 187 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 AC018692.3-201ENST00000623929 123 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 AC025031.4-201ENST00000621248 3271 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 LINC01355-201ENST00000566551 5444 ntBASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SCUBE3Q8IX30 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 Y_RNA.346-201ENST00000365385 112 ntBASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 SNORD18B-201ENST00000365659 72 ntBASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 SNORA26.2-201ENST00000390922 122 ntBASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 AL691449.1-201ENST00000426570 421 ntBASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 AC004386.2-201ENST00000441858 148 ntBASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 RPS4XP2-201ENST00000458402 793 ntBASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 Y_RNA.649-201ENST00000459077 103 ntBASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 AC117454.1-201ENST00000491120 168 ntBASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 AC108022.1-201ENST00000493466 478 ntBASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 AC026402.1-201ENST00000513642 170 ntBASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 TCL6_2.1-201ENST00000615162 119 ntBASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.81□□□□□ -1.64
SCUBE3Q8IX30 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 RNU6-294P-201ENST00000364999 102 ntBASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 MIR659-201ENST00000384963 97 ntBASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 U6atac.2-201ENST00000408644 118 ntBASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 AC004866.1-201ENST00000411748 78 ntBASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 Z74021.1-201ENST00000423610 407 ntBASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 AL356535.1-201ENST00000440335 398 ntBASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 RPL23AP93-201ENST00000440847 484 ntBASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 RPS26P45-201ENST00000471748 340 ntBASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 RPS29P2-201ENST00000479278 136 ntBASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 RN7SKP46-201ENST00000515942 234 ntBASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 RNU5F-2P-201ENST00000516066 82 ntBASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 RNA5SP360-201ENST00000516555 118 ntBASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 RPL30P11-203ENST00000598995 310 ntBASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 MIR548AY-201ENST00000617669 107 ntBASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
SCUBE3Q8IX30 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms