Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF38BQ5VTL8 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF38BQ5VTL8 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.86□□□□□ -1.63
PRPF38BQ5VTL8 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF38BQ5VTL8 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF38BQ5VTL8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PRPF38BQ5VTL8 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PRPF38BQ5VTL8 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 RNU6-199P-201ENST00000362954 107 ntBASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 RNU6-801P-201ENST00000364087 105 ntBASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 Y_RNA.287-201ENST00000364853 94 ntBASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 SNORA8.3-201ENST00000384679 139 ntBASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 TBCAP1-201ENST00000436520 327 ntBASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 AC108022.1-201ENST00000493466 478 ntBASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 RNU4-57P-201ENST00000515980 135 ntBASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 RNU6-709P-201ENST00000517257 104 ntBASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 AC022616.8-201ENST00000533569 253 ntBASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 AL034555.1-201ENST00000604816 211 ntBASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 U3.45-201ENST00000607547 219 ntBASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 AC005520.5-201ENST00000613926 164 ntBASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 AC013791.1-201ENST00000616619 62 ntBASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 AC010329.5-201ENST00000623497 2174 ntBASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PRPF38BQ5VTL8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 IL33-203ENST00000456383 2501 ntTSL 5 BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 AC110774.1-201ENST00000623567 2018 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 RNU6-270P-201ENST00000364131 105 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 RNU6-454P-201ENST00000364292 107 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 RNU4-10P-201ENST00000364383 140 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 MIR128-1-201ENST00000384921 82 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 AL133475.1-201ENST00000404414 305 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 RPL23AP52-201ENST00000439311 478 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 AP000873.1-201ENST00000463987 400 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 AC006445.2-201ENST00000510061 472 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 RNA5SP49-201ENST00000516450 115 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 RNU7-121P-201ENST00000516604 62 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 AP004242.1-201ENST00000533701 349 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 AC093249.4-201ENST00000564755 259 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 DNAJC19P2-201ENST00000593340 302 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 MIR6500-201ENST00000622700 86 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 AC018692.3-201ENST00000623929 123 ntBASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PRPF38BQ5VTL8 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
PRPF38BQ5VTL8 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.84□□□□□ -1.64
PRPF38BQ5VTL8 AC134026.1-201ENST00000623249 2239 ntBASIC4.84□□□□□ -1.64
PRPF38BQ5VTL8 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.84□□□□□ -1.64
PRPF38BQ5VTL8 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PRPF38BQ5VTL8 AF127577.6-201ENST00000623352 2191 ntBASIC4.84□□□□□ -1.64
PRPF38BQ5VTL8 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PRPF38BQ5VTL8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 SNORA63.4-201ENST00000362763 126 ntBASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 SNORA26.5-201ENST00000391215 123 ntBASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 RPS29P4-201ENST00000414733 161 ntBASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 RNU6-513P-201ENST00000516104 104 ntBASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 RNU1-117P-201ENST00000517041 158 ntBASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 AC024614.2-201ENST00000577584 372 ntBASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 MIR3690-201ENST00000580266 75 ntBASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 HMGN2P15-201ENST00000585707 270 ntBASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 SNORD11B-201ENST00000607707 90 ntBASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 AC008873.1-201ENST00000625051 138 ntBASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PRPF38BQ5VTL8 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms