Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD11P31277 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
HOXD11P31277 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD11P31277 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HOXD11P31277 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD11P31277 RNU6-424P-201ENST00000384367 105 ntBASIC6.14□□□□□ -1.43
HOXD11P31277 RN7SKP167-201ENST00000411047 285 ntBASIC6.14□□□□□ -1.43
HOXD11P31277 snoU13.22-201ENST00000459428 104 ntBASIC6.14□□□□□ -1.43
HOXD11P31277 RPS21P4-201ENST00000487122 248 ntBASIC6.14□□□□□ -1.43
HOXD11P31277 MIR4776-2-201ENST00000580204 80 ntBASIC6.14□□□□□ -1.43
HOXD11P31277 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXD11P31277 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HOXD11P31277 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD11P31277 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HOXD11P31277 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD11P31277 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXD11P31277 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXD11P31277 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD11P31277 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD11P31277 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD11P31277 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXD11P31277 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD11P31277 RNA5SP479-201ENST00000364858 117 ntBASIC6.13□□□□□ -1.43
HOXD11P31277 Y_RNA.508-201ENST00000384502 114 ntBASIC6.13□□□□□ -1.43
HOXD11P31277 RNU11-201ENST00000387069 134 ntBASIC6.13□□□□□ -1.43
HOXD11P31277 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXD11P31277 U3.44-201ENST00000458938 192 ntBASIC6.13□□□□□ -1.43
HOXD11P31277 AL360012.1-201ENST00000602813 131 ntBASIC6.13□□□□□ -1.43
HOXD11P31277 MIR6758-201ENST00000620653 63 ntBASIC6.13□□□□□ -1.43
HOXD11P31277 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXD11P31277 AC020658.2-201ENST00000559030 4020 ntBASIC6.13□□□□□ -1.43
HOXD11P31277 AC144833.1-201ENST00000567953 4089 ntBASIC6.13□□□□□ -1.43
HOXD11P31277 MAPK10-263ENST00000641052 4307 ntBASIC6.13□□□□□ -1.43
HOXD11P31277 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD11P31277 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD11P31277 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD11P31277 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXD11P31277 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXD11P31277 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXD11P31277 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD11P31277 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD11P31277 RNU6-1307P-201ENST00000391012 103 ntBASIC6.12□□□□□ -1.43
HOXD11P31277 RNA5SP323-201ENST00000391094 133 ntBASIC6.12□□□□□ -1.43
HOXD11P31277 RN7SKP281-201ENST00000410472 352 ntBASIC6.12□□□□□ -1.43
HOXD11P31277 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
HOXD11P31277 SNORD4B-201ENST00000459083 72 ntBASIC6.12□□□□□ -1.43
HOXD11P31277 RNU6-586P-201ENST00000517265 104 ntBASIC6.12□□□□□ -1.43
HOXD11P31277 AL049872.1-201ENST00000556323 322 ntBASIC6.12□□□□□ -1.43
HOXD11P31277 MIR4796-201ENST00000580742 81 ntBASIC6.12□□□□□ -1.43
HOXD11P31277 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD11P31277 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD11P31277 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXD11P31277 Z83843.1-201ENST00000604070 3685 ntBASIC6.12□□□□□ -1.43
HOXD11P31277 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXD11P31277 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD11P31277 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD11P31277 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HOXD11P31277 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD11P31277 LCOR-201ENST00000286067 4542 ntBASIC6.11□□□□□ -1.43
HOXD11P31277 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXD11P31277 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HOXD11P31277 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
HOXD11P31277 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD11P31277 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HOXD11P31277 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HOXD11P31277 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD11P31277 MIR154-201ENST00000385243 84 ntBASIC6.11□□□□□ -1.43
HOXD11P31277 PTMAP2-201ENST00000397627 327 ntBASIC6.11□□□□□ -1.43
HOXD11P31277 MIR1267-201ENST00000408723 78 ntBASIC6.11□□□□□ -1.43
HOXD11P31277 RNA5SP487-201ENST00000410186 122 ntBASIC6.11□□□□□ -1.43
HOXD11P31277 GOT2P5-201ENST00000433995 546 ntBASIC6.11□□□□□ -1.43
HOXD11P31277 AC090958.1-201ENST00000511122 351 ntBASIC6.11□□□□□ -1.43
HOXD11P31277 AC007536.1-201ENST00000533382 349 ntBASIC6.11□□□□□ -1.43
HOXD11P31277 AC209154.1-201ENST00000582156 337 ntBASIC6.11□□□□□ -1.43
HOXD11P31277 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD11P31277 AL136131.3-201ENST00000607600 188 ntBASIC6.11□□□□□ -1.43
HOXD11P31277 MIR1248-201ENST00000629190 106 ntBASIC6.11□□□□□ -1.43
HOXD11P31277 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD11P31277 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HOXD11P31277 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
HOXD11P31277 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD11P31277 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HOXD11P31277 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD11P31277 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD11P31277 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
HOXD11P31277 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXD11P31277 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD11P31277 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
HOXD11P31277 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD11P31277 AL133243.3-201ENST00000617415 3004 ntBASIC6.1□□□□□ -1.43
HOXD11P31277 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD11P31277 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD11P31277 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
HOXD11P31277 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD11P31277 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD11P31277 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD11P31277 RNA5SP183-201ENST00000362452 119 ntBASIC6.1□□□□□ -1.43
HOXD11P31277 RNVU1-6-201ENST00000364688 164 ntBASIC6.1□□□□□ -1.43
HOXD11P31277 SNORD56.6-201ENST00000384569 71 ntBASIC6.1□□□□□ -1.43
HOXD11P31277 Y_RNA.532-201ENST00000384590 113 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms