Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.84□□□□□ -1.63
ALDH1A1P00352 AP001642.1-201ENST00000624727 2117 ntBASIC4.84□□□□□ -1.63
ALDH1A1P00352 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ALDH1A1P00352 RNA5SP307-201ENST00000362863 116 ntBASIC4.84□□□□□ -1.63
ALDH1A1P00352 Y_RNA.280-201ENST00000364765 112 ntBASIC4.84□□□□□ -1.63
ALDH1A1P00352 Z98749.2-208ENST00000381646 500 ntBASIC4.84□□□□□ -1.63
ALDH1A1P00352 SNORA72.4-201ENST00000384174 132 ntBASIC4.84□□□□□ -1.63
ALDH1A1P00352 RNU6-793P-201ENST00000384233 104 ntBASIC4.84□□□□□ -1.63
ALDH1A1P00352 MIR526A2-201ENST00000390198 65 ntBASIC4.84□□□□□ -1.63
ALDH1A1P00352 SNORA75.5-201ENST00000391291 81 ntBASIC4.84□□□□□ -1.63
ALDH1A1P00352 AC007969.2-201ENST00000441891 191 ntBASIC4.84□□□□□ -1.63
ALDH1A1P00352 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.84□□□□□ -1.63
ALDH1A1P00352 AC016632.1-201ENST00000503994 196 ntBASIC4.84□□□□□ -1.63
ALDH1A1P00352 CYCSP30-201ENST00000546447 172 ntBASIC4.84□□□□□ -1.63
ALDH1A1P00352 HSPE1P4-201ENST00000550617 308 ntBASIC4.84□□□□□ -1.63
ALDH1A1P00352 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ALDH1A1P00352 AC006380.1-201ENST00000603598 186 ntBASIC4.84□□□□□ -1.63
ALDH1A1P00352 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.84□□□□□ -1.63
ALDH1A1P00352 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ALDH1A1P00352 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.84□□□□□ -1.63
ALDH1A1P00352 U6.99-201ENST00000637524 83 ntBASIC4.84□□□□□ -1.63
ALDH1A1P00352 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.84□□□□□ -1.63
ALDH1A1P00352 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.84□□□□□ -1.63
ALDH1A1P00352 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
ALDH1A1P00352 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ALDH1A1P00352 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.84□□□□□ -1.64
ALDH1A1P00352 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ALDH1A1P00352 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ALDH1A1P00352 CENPCP1-201ENST00000533085 2578 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.83□□□□□ -1.64
ALDH1A1P00352 Y_RNA.35-201ENST00000362601 101 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 RNU6-1285P-201ENST00000363480 105 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 RNU6-173P-201ENST00000364215 104 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 SNORD116-21-201ENST00000384507 92 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 MIR518D-201ENST00000385014 87 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 MT-TT-201ENST00000387460 66 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 RN7SKP156-201ENST00000410308 342 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 AL356867.1-201ENST00000429623 299 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.83□□□□□ -1.64
ALDH1A1P00352 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC4.83□□□□□ -1.64
ALDH1A1P00352 HMGB3P8-201ENST00000449709 577 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 AL451050.1-201ENST00000450126 415 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 KC877373.1-201ENST00000479066 408 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 Y_RNA.677-201ENST00000516401 85 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
ALDH1A1P00352 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC4.83□□□□□ -1.64
ALDH1A1P00352 Y_RNA.757-201ENST00000578934 114 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 SNORD84-203ENST00000584275 78 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 MIR4298-201ENST00000584380 73 ntBASIC4.83□□□□□ -1.64
ALDH1A1P00352 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.83□□□□□ -1.64
ALDH1A1P00352 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ALDH1A1P00352 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
ALDH1A1P00352 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ALDH1A1P00352 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.83□□□□□ -1.64
ALDH1A1P00352 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.83□□□□□ -1.64
ALDH1A1P00352 MAPK10-372ENST00000641954 3413 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
ALDH1A1P00352 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ALDH1A1P00352 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ALDH1A1P00352 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ALDH1A1P00352 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ALDH1A1P00352 MIR450A1-201ENST00000362262 91 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 Y_RNA.111-201ENST00000363248 100 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 RNU6-324P-201ENST00000363957 106 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 RNU1-140P-201ENST00000365040 165 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ALDH1A1P00352 RNU6-245P-201ENST00000384020 107 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 Y_RNA.521-201ENST00000384560 114 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 RNA5SP475-201ENST00000410568 110 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 RN7SKP61-201ENST00000410642 295 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 Y_RNA.630-201ENST00000411370 108 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 AC074117.2-201ENST00000417130 397 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 AL714022.1-201ENST00000439897 151 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 IFNWP4-201ENST00000453148 294 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 RNU1-95P-201ENST00000516357 160 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 RNU1-128P-201ENST00000516704 160 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 AC090132.2-201ENST00000615881 347 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 MIR7151-201ENST00000617477 60 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.82□□□□□ -1.64
ALDH1A1P00352 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ALDH1A1P00352 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.82□□□□□ -1.64
ALDH1A1P00352 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.82□□□□□ -1.64
ALDH1A1P00352 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
ALDH1A1P00352 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
ALDH1A1P00352 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ALDH1A1P00352 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
ALDH1A1P00352 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.81□□□□□ -1.64
ALDH1A1P00352 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
ALDH1A1P00352 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
ALDH1A1P00352 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.81□□□□□ -1.64
ALDH1A1P00352 RNA5SP22-201ENST00000365393 109 ntBASIC4.81□□□□□ -1.64
ALDH1A1P00352 SNORA12.1-201ENST00000390873 148 ntBASIC4.81□□□□□ -1.64
ALDH1A1P00352 RNU6-1228P-201ENST00000391014 107 ntBASIC4.81□□□□□ -1.64
ALDH1A1P00352 RPS29P19-201ENST00000479709 171 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms