Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 RNY3P5-201ENST00000384127 102 ntBASIC4.97□□□□□ -1.61
ACTN4O43707 SNORA79-201ENST00000408376 140 ntBASIC4.97□□□□□ -1.61
ACTN4O43707 IFNWP4-201ENST00000453148 294 ntBASIC4.97□□□□□ -1.61
ACTN4O43707 HMGB1P22-201ENST00000505315 124 ntBASIC4.97□□□□□ -1.61
ACTN4O43707 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.97□□□□□ -1.61
ACTN4O43707 AC015795.1-201ENST00000513669 327 ntBASIC4.97□□□□□ -1.61
ACTN4O43707 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.97□□□□□ -1.61
ACTN4O43707 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ACTN4O43707 AC139713.2-214ENST00000642059 1811 ntBASIC4.97□□□□□ -1.61
ACTN4O43707 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.97□□□□□ -1.61
ACTN4O43707 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.97□□□□□ -1.61
ACTN4O43707 AL139811.1-201ENST00000424779 2299 ntBASIC4.97□□□□□ -1.61
ACTN4O43707 AC106871.1-201ENST00000568324 3102 ntBASIC4.97□□□□□ -1.61
ACTN4O43707 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
ACTN4O43707 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
ACTN4O43707 AC022336.2-201ENST00000568966 2538 ntBASIC4.96□□□□□ -1.61
ACTN4O43707 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.96□□□□□ -1.61
ACTN4O43707 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
ACTN4O43707 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ACTN4O43707 RNU1-94P-201ENST00000362627 173 ntBASIC4.96□□□□□ -1.62
ACTN4O43707 Y_RNA.280-201ENST00000364765 112 ntBASIC4.96□□□□□ -1.62
ACTN4O43707 RNU6-1181P-201ENST00000384191 106 ntBASIC4.96□□□□□ -1.62
ACTN4O43707 MIR550A3-201ENST00000390735 95 ntBASIC4.96□□□□□ -1.62
ACTN4O43707 RNA5SP390-201ENST00000410191 113 ntBASIC4.96□□□□□ -1.62
ACTN4O43707 Y_RNA.622-201ENST00000411091 108 ntBASIC4.96□□□□□ -1.62
ACTN4O43707 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.96□□□□□ -1.62
ACTN4O43707 RNU2-60P-201ENST00000517290 128 ntBASIC4.96□□□□□ -1.62
ACTN4O43707 MTND6P33-201ENST00000571794 183 ntBASIC4.96□□□□□ -1.62
ACTN4O43707 MIR378D2-201ENST00000580636 98 ntBASIC4.96□□□□□ -1.62
ACTN4O43707 AC100827.5-201ENST00000615883 426 ntBASIC4.96□□□□□ -1.62
ACTN4O43707 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ACTN4O43707 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
ACTN4O43707 AC138915.1-201ENST00000565427 1685 ntBASIC4.96□□□□□ -1.62
ACTN4O43707 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ACTN4O43707 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
ACTN4O43707 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.95□□□□□ -1.62
ACTN4O43707 U8.1-201ENST00000362843 134 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 Y_RNA.114-201ENST00000363265 113 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 SNORD87-201ENST00000364849 89 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
ACTN4O43707 RNU6-880P-201ENST00000384526 107 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 EI24P2-201ENST00000397776 1076 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 MIR1911-201ENST00000410783 80 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 RNU6-383P-201ENST00000410864 94 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 AC099548.1-201ENST00000421443 426 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 RPL7AP28-201ENST00000464513 571 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 RPS26P28-201ENST00000470806 348 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
ACTN4O43707 RNA5SP497-201ENST00000516081 97 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 SNORD11B-201ENST00000607707 90 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 AC004832.5-201ENST00000608677 401 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 MIR6730-201ENST00000622213 67 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 SNORD98-201ENST00000636377 67 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
ACTN4O43707 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
ACTN4O43707 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
ACTN4O43707 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
ACTN4O43707 AC018555.1-201ENST00000567548 1980 ntBASIC4.95□□□□□ -1.62
ACTN4O43707 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ACTN4O43707 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ACTN4O43707 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ACTN4O43707 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
ACTN4O43707 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
ACTN4O43707 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ACTN4O43707 RNU6-217P-201ENST00000384164 104 ntBASIC4.94□□□□□ -1.62
ACTN4O43707 TOMM22P1-201ENST00000418578 312 ntBASIC4.94□□□□□ -1.62
ACTN4O43707 ABCF2P2-201ENST00000450549 296 ntBASIC4.94□□□□□ -1.62
ACTN4O43707 RNA5SP154-201ENST00000516193 111 ntBASIC4.94□□□□□ -1.62
ACTN4O43707 MIR4270-201ENST00000581799 70 ntBASIC4.94□□□□□ -1.62
ACTN4O43707 MIR4480-201ENST00000582492 71 ntBASIC4.94□□□□□ -1.62
ACTN4O43707 MIR3136-201ENST00000583498 78 ntBASIC4.94□□□□□ -1.62
ACTN4O43707 SNRPGP15-201ENST00000600149 222 ntBASIC4.94□□□□□ -1.62
ACTN4O43707 AC012468.1-201ENST00000604888 430 ntBASIC4.94□□□□□ -1.62
ACTN4O43707 MIR7703-201ENST00000620784 77 ntBASIC4.94□□□□□ -1.62
ACTN4O43707 AL023881.1-201ENST00000621088 301 ntBASIC4.94□□□□□ -1.62
ACTN4O43707 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ACTN4O43707 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ACTN4O43707 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.94□□□□□ -1.62
ACTN4O43707 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.94□□□□□ -1.62
ACTN4O43707 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ACTN4O43707 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.93□□□□□ -1.62
ACTN4O43707 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
ACTN4O43707 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.93□□□□□ -1.62
ACTN4O43707 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
ACTN4O43707 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
ACTN4O43707 RNU1-15P-201ENST00000353977 144 ntBASIC4.93□□□□□ -1.62
ACTN4O43707 SNORD45.3-201ENST00000363836 72 ntBASIC4.93□□□□□ -1.62
ACTN4O43707 RNVU1-6-201ENST00000364688 164 ntBASIC4.93□□□□□ -1.62
ACTN4O43707 SNORD58C-201ENST00000365223 64 ntBASIC4.93□□□□□ -1.62
ACTN4O43707 SNORA20B-201ENST00000384220 132 ntBASIC4.93□□□□□ -1.62
ACTN4O43707 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
ACTN4O43707 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.93□□□□□ -1.62
ACTN4O43707 HSPE1P21-201ENST00000438283 308 ntBASIC4.93□□□□□ -1.62
ACTN4O43707 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
ACTN4O43707 AL353748.1-201ENST00000440753 474 ntBASIC4.93□□□□□ -1.62
ACTN4O43707 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC4.93□□□□□ -1.62
ACTN4O43707 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.93□□□□□ -1.62
ACTN4O43707 RN7SL354P-201ENST00000469282 294 ntBASIC4.93□□□□□ -1.62
ACTN4O43707 AC093331.1-201ENST00000521474 169 ntBASIC4.93□□□□□ -1.62
ACTN4O43707 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms