Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 RNU6-309P-201ENST00000364573 106 ntBASIC4.52□□□□□ -1.69
H3BM21 SNORA36A-201ENST00000384221 132 ntBASIC4.52□□□□□ -1.69
H3BM21 Y_RNA.466-201ENST00000384294 113 ntBASIC4.52□□□□□ -1.69
H3BM21 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
H3BM21 MIR708-201ENST00000390708 88 ntBASIC4.52□□□□□ -1.69
H3BM21 RNU6-383P-201ENST00000410864 94 ntBASIC4.52□□□□□ -1.69
H3BM21 AL356387.2-201ENST00000422272 243 ntBASIC4.52□□□□□ -1.69
H3BM21 AC091390.3-201ENST00000426478 338 ntBASIC4.52□□□□□ -1.69
H3BM21 AL732292.1-201ENST00000426692 226 ntBASIC4.52□□□□□ -1.69
H3BM21 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
H3BM21 SCARNA10-201ENST00000459255 330 ntBASIC4.52□□□□□ -1.69
H3BM21 AC108751.2-201ENST00000469993 231 ntBASIC4.52□□□□□ -1.69
H3BM21 AC139453.2-201ENST00000487255 133 ntBASIC4.52□□□□□ -1.69
H3BM21 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.52□□□□□ -1.69
H3BM21 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.52□□□□□ -1.69
H3BM21 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.52□□□□□ -1.69
H3BM21 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.52□□□□□ -1.69
H3BM21 AL161713.1-201ENST00000555538 145 ntBASIC4.52□□□□□ -1.69
H3BM21 AC015912.2-201ENST00000571053 181 ntBASIC4.52□□□□□ -1.69
H3BM21 AL590808.1-201ENST00000618696 141 ntBASIC4.52□□□□□ -1.69
H3BM21 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.52□□□□□ -1.69
H3BM21 MAPK10-304ENST00000641341 3984 ntBASIC4.52□□□□□ -1.69
H3BM21 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H3BM21 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H3BM21 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H3BM21 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
H3BM21 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
H3BM21 AL359693.1-201ENST00000614959 2407 ntBASIC4.51□□□□□ -1.69
H3BM21 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
H3BM21 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
H3BM21 RNU6-727P-201ENST00000363592 107 ntBASIC4.51□□□□□ -1.69
H3BM21 Y_RNA.341-201ENST00000365341 102 ntBASIC4.51□□□□□ -1.69
H3BM21 RNU6-144P-201ENST00000383951 107 ntBASIC4.51□□□□□ -1.69
H3BM21 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
H3BM21 RPS12P10-201ENST00000427031 377 ntBASIC4.51□□□□□ -1.69
H3BM21 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.51□□□□□ -1.69
H3BM21 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
H3BM21 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC4.51□□□□□ -1.69
H3BM21 RPL39P34-201ENST00000477141 156 ntBASIC4.51□□□□□ -1.69
H3BM21 IGLVIV-65-201ENST00000517313 360 ntBASIC4.51□□□□□ -1.69
H3BM21 AL356157.2-201ENST00000605122 111 ntBASIC4.51□□□□□ -1.69
H3BM21 MIR6716-201ENST00000613413 80 ntBASIC4.51□□□□□ -1.69
H3BM21 MALAT1.1-201ENST00000618249 95 ntBASIC4.51□□□□□ -1.69
H3BM21 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
H3BM21 MAPK10-303ENST00000641324 3959 ntBASIC4.51□□□□□ -1.69
H3BM21 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.51□□□□□ -1.69
H3BM21 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
H3BM21 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.51□□□□□ -1.69
H3BM21 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
H3BM21 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
H3BM21 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
H3BM21 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
H3BM21 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
H3BM21 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
H3BM21 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.5□□□□□ -1.69
H3BM21 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.5□□□□□ -1.69
H3BM21 AC021146.4-201ENST00000309229 279 ntBASIC4.5□□□□□ -1.69
H3BM21 SNORD115-30-201ENST00000364117 82 ntBASIC4.5□□□□□ -1.69
H3BM21 RNU6-978P-201ENST00000364371 103 ntBASIC4.5□□□□□ -1.69
H3BM21 Y_RNA.245-201ENST00000364493 95 ntBASIC4.5□□□□□ -1.69
H3BM21 RPS20P14-201ENST00000412545 360 ntBASIC4.5□□□□□ -1.69
H3BM21 SNRPGP8-201ENST00000454064 226 ntBASIC4.5□□□□□ -1.69
H3BM21 RPL35AP15-201ENST00000468042 339 ntBASIC4.5□□□□□ -1.69
H3BM21 SNRPGP7-201ENST00000469016 106 ntBASIC4.5□□□□□ -1.69
H3BM21 AC021205.2-201ENST00000480069 347 ntBASIC4.5□□□□□ -1.69
H3BM21 MRPS36P2-201ENST00000512569 299 ntBASIC4.5□□□□□ -1.69
H3BM21 RNU6-109P-201ENST00000516364 107 ntBASIC4.5□□□□□ -1.69
H3BM21 RNU6-184P-201ENST00000516514 107 ntBASIC4.5□□□□□ -1.69
H3BM21 MIR4458-201ENST00000578872 75 ntBASIC4.5□□□□□ -1.69
H3BM21 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.5□□□□□ -1.69
H3BM21 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.5□□□□□ -1.69
H3BM21 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
H3BM21 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
H3BM21 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
H3BM21 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.5□□□□□ -1.69
H3BM21 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.49□□□□□ -1.69
H3BM21 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
H3BM21 RNU6-1249P-201ENST00000363237 111 ntBASIC4.49□□□□□ -1.69
H3BM21 Y_RNA.310-201ENST00000365063 113 ntBASIC4.49□□□□□ -1.69
H3BM21 Y_RNA.456-201ENST00000384232 111 ntBASIC4.49□□□□□ -1.69
H3BM21 RNU6-788P-201ENST00000390967 104 ntBASIC4.49□□□□□ -1.69
H3BM21 MIR1250-201ENST00000408098 113 ntBASIC4.49□□□□□ -1.69
H3BM21 AC073261.1-201ENST00000429409 121 ntBASIC4.49□□□□□ -1.69
H3BM21 RPL23AP93-201ENST00000440847 484 ntBASIC4.49□□□□□ -1.69
H3BM21 AP000705.1-201ENST00000454567 350 ntBASIC4.49□□□□□ -1.69
H3BM21 AC010531.2-201ENST00000465012 153 ntBASIC4.49□□□□□ -1.69
H3BM21 RN7SL810P-201ENST00000493031 276 ntBASIC4.49□□□□□ -1.69
H3BM21 ATP5EP1-201ENST00000510257 156 ntBASIC4.49□□□□□ -1.69
H3BM21 AC026421.1-201ENST00000519101 163 ntBASIC4.49□□□□□ -1.69
H3BM21 AC134698.5-201ENST00000519444 336 ntBASIC4.49□□□□□ -1.69
H3BM21 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
H3BM21 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
H3BM21 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
H3BM21 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
H3BM21 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
H3BM21 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.49□□□□□ -1.69
H3BM21 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
H3BM21 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
H3BM21 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
H3BM21 RNU6-1264P-201ENST00000383891 107 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 565.7 ms