Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
HRH3Q9Y5N1 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
HRH3Q9Y5N1 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.33□□□□□ -1.72
HRH3Q9Y5N1 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
HRH3Q9Y5N1 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.33□□□□□ -1.72
HRH3Q9Y5N1 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
HRH3Q9Y5N1 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 MAPK10-320ENST00000641462 6696 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 RNA5SP189-201ENST00000364920 115 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 RNU6-407P-201ENST00000365280 104 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 Y_RNA.368-201ENST00000365547 113 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 RNU6-1228P-201ENST00000391014 107 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 RPL21P17-201ENST00000397467 475 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 RNU6-1064P-201ENST00000410626 104 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 CKS1BP6-201ENST00000424932 240 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 AL357134.1-201ENST00000445848 426 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 AC146507.2-201ENST00000460608 476 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 SNORA70.12-201ENST00000516084 153 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 RNU6-453P-201ENST00000516819 85 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 RNU6-928P-201ENST00000516876 104 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 RNU1-117P-201ENST00000517041 158 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 MIR4724-201ENST00000579485 89 ntBASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
HRH3Q9Y5N1 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 AL391516.1-201ENST00000554380 2449 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 MIR367-201ENST00000362299 68 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 RNU6-1048P-201ENST00000364054 107 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 RNU6-144P-201ENST00000383951 107 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 Y_RNA.563-201ENST00000384707 108 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 AL590762.2-201ENST00000395798 571 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 AL732292.1-201ENST00000426692 226 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 AC027124.2-201ENST00000428249 105 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 AL161651.1-201ENST00000440882 223 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 RPS27P1-201ENST00000450552 247 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 AC078817.1-201ENST00000492623 435 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 VWA8P1-201ENST00000510889 176 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 RAC1P5-201ENST00000512182 576 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 AC023141.12-201ENST00000512399 199 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 RNA5SP249-201ENST00000516127 99 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 RNA5SP154-201ENST00000516193 111 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 RNU6-659P-201ENST00000516454 104 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 MIR5006-201ENST00000583027 110 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 U7.2-201ENST00000607576 63 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 AC015813.4-201ENST00000610469 179 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 AP001340.1-201ENST00000624405 217 ntBASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
HRH3Q9Y5N1 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 AL136164.4-201ENST00000625013 2135 ntBASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 SNORD113.2-201ENST00000364166 89 ntBASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 SNORD87-201ENST00000364849 89 ntBASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 RNU6-1180P-201ENST00000364935 107 ntBASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 Y_RNA.572-201ENST00000384757 98 ntBASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 MIR659-201ENST00000384963 97 ntBASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 RPEP3-201ENST00000425462 676 ntBASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 AL135790.2-201ENST00000437701 267 ntBASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 AC004386.2-201ENST00000441858 148 ntBASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 RPL36AP41-201ENST00000493820 306 ntBASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 SCARNA8-201ENST00000515924 131 ntBASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 AC090049.2-201ENST00000550377 109 ntBASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HRH3Q9Y5N1 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HRH3Q9Y5N1 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms