Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC012065.4-201ENST00000602445 679 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 AL136370.1-201ENST00000608166 691 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 AC022202.1-201ENST00000613515 211 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 Z99571.1-201ENST00000636677 394 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 AC009541.1-201ENST00000438279 2662 ntBASIC0.97□□□□□ -2.25
CCDC88CQ9P219 SNORD115-3-201ENST00000363100 82 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 RNU6-512P-201ENST00000364438 103 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 SNORA25B-201ENST00000365507 128 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CCDC88CQ9P219 MIR222-201ENST00000384992 110 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
CCDC88CQ9P219 RNU2-7P-201ENST00000410794 178 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 MTND3P17-201ENST00000416968 344 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC88CQ9P219 RPS27AP14-201ENST00000422868 454 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 AL512286.1-201ENST00000439244 400 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 RNU6-953P-201ENST00000459154 107 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 PTP4A1P4-201ENST00000512479 322 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 RNU6-677P-201ENST00000516914 101 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 MRPS36P3-201ENST00000519284 130 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC88CQ9P219 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC88CQ9P219 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.96□□□□□ -2.26
CCDC88CQ9P219 AC011604.1-201ENST00000545978 196 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 MIR4714-201ENST00000580728 77 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 AL596327.1-201ENST00000603629 213 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 AC018714.1-201ENST00000605028 208 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 AC108747.1-201ENST00000609508 535 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 AC012409.4-201ENST00000612923 249 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 uc_338.15-201ENST00000615470 191 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
CCDC88CQ9P219 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.96□□□□□ -2.26
CCDC88CQ9P219 RNU6-1010P-201ENST00000362757 107 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 Y_RNA.97-201ENST00000363094 102 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 RNU11-5P-201ENST00000391216 129 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 SSR1P2-201ENST00000415208 787 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 OR51A5P-201ENST00000415429 942 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC88CQ9P219 UBE2V1P4-201ENST00000425374 344 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 CALM2P2-201ENST00000428512 440 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 AC084290.1-201ENST00000434995 374 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 RPS25P9-201ENST00000435591 252 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 MTND2P29-201ENST00000438595 412 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC88CQ9P219 MTND2P39-201ENST00000457230 764 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 OR2A41P-201ENST00000473586 105 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 HMGB1P30-201ENST00000492455 606 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 MTND2P7-201ENST00000521337 640 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC88CQ9P219 IMMP1LP2-201ENST00000552954 492 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.96□□□□□ -2.26
CCDC88CQ9P219 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.96□□□□□ -2.26
CCDC88CQ9P219 MIR4999-201ENST00000585029 91 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 MTCO2P2-201ENST00000591258 225 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 AC144521.1-201ENST00000607148 956 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 OR4G3P-201ENST00000633500 913 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.96□□□□□ -2.26
CCDC88CQ9P219 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.96□□□□□ -2.26
CCDC88CQ9P219 RNU6-511P-201ENST00000363496 107 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 RNU4-1-201ENST00000363925 141 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
CCDC88CQ9P219 FCF1P10-201ENST00000407590 479 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 MIR1262-201ENST00000408276 93 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 AC008267.5-201ENST00000424928 265 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 AL589872.1-201ENST00000426602 288 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 HSPE1P21-201ENST00000438283 308 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 GDI2P2-201ENST00000445131 608 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 AL606517.1-201ENST00000446914 387 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.95□□□□□ -2.26
CCDC88CQ9P219 AC093852.1-201ENST00000503587 266 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 RNU5F-2P-201ENST00000516066 82 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 RNU6-1003P-201ENST00000517099 105 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.95□□□□□ -2.26
CCDC88CQ9P219 MTND2P32-201ENST00000521584 1038 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 ELOCP32-201ENST00000548625 324 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.95□□□□□ -2.26
CCDC88CQ9P219 MIR4422-201ENST00000581938 83 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 AL078605.1-201ENST00000603529 500 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 RNU6-87P-201ENST00000607561 108 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.95□□□□□ -2.26
CCDC88CQ9P219 AL445523.1-201ENST00000451184 1362 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 RBBP8P1-201ENST00000449447 1844 ntBASIC0.95□□□□□ -2.26
CCDC88CQ9P219 RNU5E-7P-201ENST00000365290 117 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 SNORA4.3-201ENST00000365564 137 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 RNU6-925P-201ENST00000384629 104 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 MIR620-201ENST00000385232 95 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AL365338.1-201ENST00000422282 858 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AC011233.1-201ENST00000422812 283 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AL354692.1-201ENST00000423044 315 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 RPL37P21-201ENST00000435890 276 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 TRAPPC2P8-201ENST00000440676 396 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.94□□□□□ -2.26
CCDC88CQ9P219 snoU13.14-201ENST00000459372 104 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 RPL39P36-201ENST00000490784 156 ntBASIC0.94□□□□□ -2.26
CCDC88CQ9P219 MTCO3P9-201ENST00000506989 781 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms