Protein–RNA interactions for Protein: Q8NDN9

RCBTB1, RCC1 and BTB domain-containing protein 1, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCBTB1Q8NDN9 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
RCBTB1Q8NDN9 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 AF117829.1-206ENST00000621883 3802 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 RNU6-222P-201ENST00000362438 107 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 Y_RNA.84-201ENST00000363011 104 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 RNU5B-2P-201ENST00000363036 113 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 RNU6-1026P-201ENST00000384465 108 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 Y_RNA.504-201ENST00000384481 104 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 RNU6-541P-201ENST00000384709 110 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 RNA5SP390-201ENST00000410191 113 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 RNU6-1203P-201ENST00000410703 110 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 RPS29P4-201ENST00000414733 161 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 AC005300.1-201ENST00000428401 373 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 HMGB1P37-201ENST00000439613 609 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 PRSS3P4-201ENST00000453323 162 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 AC098869.1-201ENST00000481627 292 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 MTND1P19-201ENST00000511780 315 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 AC026726.1-201ENST00000512859 601 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 RNU5F-8P-201ENST00000515941 111 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 AC006199.1-201ENST00000548728 219 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 AC240442.1-201ENST00000616055 283 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 MIR376A1-201ENST00000616574 68 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 SNORA43.4-201ENST00000629559 138 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RCBTB1Q8NDN9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 Y_RNA.60-201ENST00000362831 98 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 RNU6-487P-201ENST00000365430 104 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 RNU1-139P-201ENST00000391307 165 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 RN7SKP61-201ENST00000410642 295 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 AC078809.1-201ENST00000427601 140 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 EIF1P2-201ENST00000428233 350 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 GPM6BP3-201ENST00000442797 145 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 MTND4LP30-201ENST00000454092 297 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 snoU13.28-201ENST00000459235 104 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 SNRPGP7-201ENST00000469016 106 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 RPL30P14-201ENST00000482744 348 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 RNU6-1114P-201ENST00000516022 107 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 ACA59.2-201ENST00000517061 156 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 MIR5571-201ENST00000577998 113 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 MIR4659A-201ENST00000580269 81 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 MIR3922-201ENST00000585192 84 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 AC073410.2-201ENST00000603240 332 ntBASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RCBTB1Q8NDN9 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RCBTB1Q8NDN9 MIR335-201ENST00000362173 94 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 Y_RNA.143-201ENST00000363520 106 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 RNU6-137P-201ENST00000363680 108 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 Y_RNA.477-201ENST00000384352 108 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 Y_RNA.515-201ENST00000384535 112 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 UBA52P6-201ENST00000399822 382 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 MIR548H3-201ENST00000408771 118 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 SSXP4-201ENST00000451349 245 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 AP000870.1-201ENST00000472927 406 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 RPS4XP22-201ENST00000480755 780 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 AP001025.1-201ENST00000486139 332 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 AC110768.1-201ENST00000509222 400 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 SNORA31.6-201ENST00000516241 130 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 RNU6-1198P-201ENST00000516904 67 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 AC136932.1-201ENST00000574771 208 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 MIR4300-201ENST00000581016 96 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 HMGN2P15-201ENST00000585707 270 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 AC012433.1-201ENST00000588916 398 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 AL161756.2-201ENST00000604597 246 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 AP001282.2-201ENST00000616149 309 ntBASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RCBTB1Q8NDN9 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
RCBTB1Q8NDN9 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.64□□□□□ -1.83
RCBTB1Q8NDN9 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms