Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 SNORD45.3-201ENST00000363836 72 ntBASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 Y_RNA.290-201ENST00000364879 114 ntBASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 SNORA71.2-201ENST00000364941 134 ntBASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 Y_RNA.565-201ENST00000384719 101 ntBASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 RN7SKP27-201ENST00000410684 333 ntBASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 AL135786.1-201ENST00000415892 214 ntBASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 APOA2-207ENST00000470459 416 ntTSL 5 BASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 HMGB1P22-201ENST00000505315 124 ntBASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 AC015795.1-201ENST00000513669 327 ntBASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 RN7SKP57-201ENST00000517248 293 ntBASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 AP004607.1-201ENST00000524456 203 ntBASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 AC025946.2-201ENST00000603398 234 ntBASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.05□□□□□ -1.6
TRAF7Q6Q0C0 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 AL589743.1-201ENST00000551932 2712 ntBASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 RNU6-137P-201ENST00000363680 108 ntBASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 RNU6-978P-201ENST00000364371 103 ntBASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 RNU6-590P-201ENST00000365039 107 ntBASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 RNU6-675P-201ENST00000384236 104 ntBASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 Y_RNA.622-201ENST00000411091 108 ntBASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 SNRPGP8-201ENST00000454064 226 ntBASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 UBE2CP3-201ENST00000502715 450 ntBASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 SNORA70.16-201ENST00000516390 95 ntBASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 AL022345.2-201ENST00000606307 135 ntBASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 AL023881.1-201ENST00000621088 301 ntBASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TRAF7Q6Q0C0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 Y_RNA.498-201ENST00000384460 102 ntBASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 SNORA70C-201ENST00000384538 135 ntBASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 CALM2P4-201ENST00000430810 426 ntBASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 AC091167.1-201ENST00000492017 396 ntBASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 RN7SL810P-201ENST00000493031 276 ntBASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 AC022254.1-201ENST00000567857 235 ntBASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 MIR5009-201ENST00000578736 100 ntBASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 AC136601.2-201ENST00000604356 474 ntBASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 RNA5SP196-201ENST00000625967 102 ntBASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 BMS1P21-201ENST00000634565 365 ntBASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TRAF7Q6Q0C0 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 U3.15-201ENST00000365398 212 ntBASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 U3.40-201ENST00000408706 208 ntBASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 RNA5SP296-201ENST00000410523 111 ntBASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 RPL23AP93-201ENST00000440847 484 ntBASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 RN7SL98P-201ENST00000462271 300 ntBASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 AC091153.1-201ENST00000466297 402 ntBASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 SNRPGP3-201ENST00000469405 227 ntBASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 AC007229.1-201ENST00000590455 412 ntBASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 ARF4P1-201ENST00000605447 541 ntBASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 AC241585.2-209ENST00000638217 143 ntBASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 AC118273.1-201ENST00000525324 3006 ntBASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 AL672296.1-201ENST00000427780 2158 ntBASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRAF7Q6Q0C0 AC073346.2-201ENST00000624724 2058 ntBASIC5.01□□□□□ -1.61
TRAF7Q6Q0C0 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.01□□□□□ -1.61
TRAF7Q6Q0C0 RNU6-1205P-201ENST00000363625 106 ntBASIC5.01□□□□□ -1.61
TRAF7Q6Q0C0 SDHCP2-201ENST00000398565 501 ntBASIC5.01□□□□□ -1.61
TRAF7Q6Q0C0 RNA5SP44-201ENST00000410446 133 ntBASIC5.01□□□□□ -1.61
TRAF7Q6Q0C0 RNA5SP31-201ENST00000411144 127 ntBASIC5.01□□□□□ -1.61
TRAF7Q6Q0C0 RPL35AP21-201ENST00000437667 333 ntBASIC5.01□□□□□ -1.61
TRAF7Q6Q0C0 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms