Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 ENPP7P11-201ENST00000505915 627 ntBASIC4.52□□□□□ -1.69
FOXC1Q12948 PARP4P3-201ENST00000510265 317 ntBASIC4.52□□□□□ -1.69
FOXC1Q12948 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXC1Q12948 AC025281.1-201ENST00000567026 265 ntBASIC4.52□□□□□ -1.69
FOXC1Q12948 MIR5699-201ENST00000578903 90 ntBASIC4.52□□□□□ -1.69
FOXC1Q12948 MIR3923-201ENST00000579521 83 ntBASIC4.52□□□□□ -1.69
FOXC1Q12948 FAM71BP1-201ENST00000604431 523 ntBASIC4.52□□□□□ -1.69
FOXC1Q12948 AL121932.1-201ENST00000605542 214 ntBASIC4.52□□□□□ -1.69
FOXC1Q12948 AL021997.2-201ENST00000615674 271 ntBASIC4.52□□□□□ -1.69
FOXC1Q12948 AC018692.3-201ENST00000623929 123 ntBASIC4.52□□□□□ -1.69
FOXC1Q12948 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXC1Q12948 AL589743.1-201ENST00000551932 2712 ntBASIC4.52□□□□□ -1.69
FOXC1Q12948 AC004925.1-201ENST00000624256 2706 ntBASIC4.52□□□□□ -1.69
FOXC1Q12948 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXC1Q12948 OR14L1P-202ENST00000641545 3009 ntBASIC4.52□□□□□ -1.69
FOXC1Q12948 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.52□□□□□ -1.69
FOXC1Q12948 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXC1Q12948 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXC1Q12948 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXC1Q12948 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXC1Q12948 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
FOXC1Q12948 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXC1Q12948 SMG1P4-204ENST00000523028 4131 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
FOXC1Q12948 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
FOXC1Q12948 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXC1Q12948 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXC1Q12948 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
FOXC1Q12948 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXC1Q12948 Y_RNA.124-201ENST00000363339 93 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 RNU6-217P-201ENST00000384164 104 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 SNORD116-13-201ENST00000384408 92 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 PPIAP31-201ENST00000405422 495 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 RNA5SP201-201ENST00000410316 124 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 CYCSP19-201ENST00000411715 316 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 CRYBB2P1-203ENST00000415709 538 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 AL139281.1-201ENST00000422120 335 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 REREP1Y-201ENST00000422655 198 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 AF228730.3-201ENST00000436691 102 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 AL691482.1-201ENST00000453255 87 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC4.51□□□□□ -1.69
FOXC1Q12948 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.51□□□□□ -1.69
FOXC1Q12948 snoU13.29-201ENST00000459370 104 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 AIG1P1-201ENST00000503376 148 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC4.51□□□□□ -1.69
FOXC1Q12948 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.51□□□□□ -1.69
FOXC1Q12948 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.51□□□□□ -1.69
FOXC1Q12948 PCGEM1.1-201ENST00000613431 131 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 AC005562.2-201ENST00000618264 111 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 U3.53-201ENST00000628922 216 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
FOXC1Q12948 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXC1Q12948 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXC1Q12948 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXC1Q12948 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXC1Q12948 Z95331.1-201ENST00000623075 23112 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 AL450345.1-202ENST00000605741 3881 ntBASIC4.51□□□□□ -1.69
FOXC1Q12948 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
FOXC1Q12948 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.51□□□□□ -1.69
FOXC1Q12948 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXC1Q12948 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.5□□□□□ -1.69
FOXC1Q12948 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
FOXC1Q12948 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXC1Q12948 AC126323.6-202ENST00000568092 3511 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
FOXC1Q12948 SALL4P2-201ENST00000423288 2910 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
FOXC1Q12948 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXC1Q12948 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
FOXC1Q12948 RNU4-41P-201ENST00000364426 143 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 RNU6-1134P-201ENST00000365156 101 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 RNA5SP283-201ENST00000365604 119 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 RNA5SP127-201ENST00000411051 133 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.5□□□□□ -1.69
FOXC1Q12948 CYCSP48-201ENST00000417124 323 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 RPL23AP82-202ENST00000427528 469 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 FTLP19-201ENST00000433300 394 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 NDUFB1P1-201ENST00000435191 180 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 PGBD4P5-201ENST00000445958 426 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 RPL23AP7-203ENST00000449021 469 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 AC107297.1-201ENST00000459991 176 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 CENPBD1P1-201ENST00000464061 469 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 AC090602.1-201ENST00000469695 252 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.5□□□□□ -1.69
FOXC1Q12948 RNU6-1337P-201ENST00000516525 95 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 RNU7-116P-201ENST00000516940 62 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 AL049861.1-201ENST00000603130 150 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 AC008739.3-201ENST00000603262 127 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.5□□□□□ -1.69
FOXC1Q12948 AL161756.2-201ENST00000604597 246 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 MIR3653-201ENST00000625572 110 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.5□□□□□ -1.69
FOXC1Q12948 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
FOXC1Q12948 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
FOXC1Q12948 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
FOXC1Q12948 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
FOXC1Q12948 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
FOXC1Q12948 AL159152.1-201ENST00000635019 2587 ntBASIC4.5□□□□□ -1.69
FOXC1Q12948 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms