Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AC068533.2-201ENST00000411872 306 ntBASIC0.75□□□□□ -2.29
NUP98P52948 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.75□□□□□ -2.29
NUP98P52948 JTBP1-201ENST00000441314 247 ntBASIC0.75□□□□□ -2.29
NUP98P52948 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.75□□□□□ -2.29
NUP98P52948 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.75□□□□□ -2.29
NUP98P52948 AC009646.1-201ENST00000510455 318 ntBASIC0.75□□□□□ -2.29
NUP98P52948 RNA5SP330-201ENST00000517096 96 ntBASIC0.75□□□□□ -2.29
NUP98P52948 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.75□□□□□ -2.29
NUP98P52948 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.75□□□□□ -2.29
NUP98P52948 AC090115.3-201ENST00000553218 849 ntBASIC0.75□□□□□ -2.29
NUP98P52948 AL157871.3-201ENST00000557231 293 ntBASIC0.75□□□□□ -2.29
NUP98P52948 AC174048.1-201ENST00000603389 144 ntBASIC0.75□□□□□ -2.29
NUP98P52948 AC093875.1-201ENST00000623688 504 ntBASIC0.75□□□□□ -2.29
NUP98P52948 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
NUP98P52948 AL589743.1-201ENST00000551932 2712 ntBASIC0.75□□□□□ -2.29
NUP98P52948 AC100821.1-201ENST00000523153 2479 ntBASIC0.74□□□□□ -2.29
NUP98P52948 snoU2_19.1-201ENST00000362361 80 ntBASIC0.74□□□□□ -2.29
NUP98P52948 RNU1-124P-201ENST00000363861 145 ntBASIC0.74□□□□□ -2.29
NUP98P52948 SNORA4.3-201ENST00000365564 137 ntBASIC0.74□□□□□ -2.29
NUP98P52948 SNORA70.7-201ENST00000384159 133 ntBASIC0.74□□□□□ -2.29
NUP98P52948 AL079342.2-201ENST00000403367 482 ntBASIC0.74□□□□□ -2.29
NUP98P52948 AL359634.1-202ENST00000404721 284 ntBASIC0.74□□□□□ -2.29
NUP98P52948 UBE2V1P10-201ENST00000414685 269 ntBASIC0.74□□□□□ -2.29
NUP98P52948 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.74□□□□□ -2.29
NUP98P52948 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.74□□□□□ -2.29
NUP98P52948 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
NUP98P52948 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.74□□□□□ -2.29
NUP98P52948 UBE2V1P8-201ENST00000437166 265 ntBASIC0.74□□□□□ -2.29
NUP98P52948 MTCYBP42-201ENST00000444653 1130 ntBASIC0.74□□□□□ -2.29
NUP98P52948 AL096829.2-201ENST00000446582 742 ntBASIC0.74□□□□□ -2.29
NUP98P52948 AC132479.1-201ENST00000449160 144 ntBASIC0.74□□□□□ -2.29
NUP98P52948 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.74□□□□□ -2.29
NUP98P52948 RNVU1-2-201ENST00000516326 135 ntBASIC0.74□□□□□ -2.29
NUP98P52948 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.74□□□□□ -2.29
NUP98P52948 MIR3169-201ENST00000578032 83 ntBASIC0.74□□□□□ -2.29
NUP98P52948 SNORA77B-201ENST00000578179 125 ntBASIC0.74□□□□□ -2.29
NUP98P52948 NIFKP6-201ENST00000598115 845 ntBASIC0.74□□□□□ -2.29
NUP98P52948 AC009229.3-201ENST00000608056 282 ntBASIC0.74□□□□□ -2.29
NUP98P52948 AC104985.3-201ENST00000623479 597 ntBASIC0.74□□□□□ -2.29
NUP98P52948 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.73□□□□□ -2.29
NUP98P52948 RNU6-560P-201ENST00000364007 108 ntBASIC0.73□□□□□ -2.29
NUP98P52948 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.73□□□□□ -2.29
NUP98P52948 Y_RNA.408-201ENST00000383987 102 ntBASIC0.73□□□□□ -2.29
NUP98P52948 RNU6-1235P-201ENST00000384559 107 ntBASIC0.73□□□□□ -2.29
NUP98P52948 MIR19A-201ENST00000384878 82 ntBASIC0.73□□□□□ -2.29
NUP98P52948 RPL17P35-201ENST00000432217 549 ntBASIC0.73□□□□□ -2.29
NUP98P52948 RPS15AP10-201ENST00000432472 382 ntBASIC0.73□□□□□ -2.29
NUP98P52948 SNRPEP7-201ENST00000438350 220 ntBASIC0.73□□□□□ -2.29
NUP98P52948 MTND2P3-201ENST00000452458 470 ntBASIC0.73□□□□□ -2.29
NUP98P52948 snoU13.14-201ENST00000459372 104 ntBASIC0.73□□□□□ -2.29
NUP98P52948 RNU6-498P-201ENST00000459468 107 ntBASIC0.73□□□□□ -2.29
NUP98P52948 AC104563.1-201ENST00000476147 376 ntBASIC0.73□□□□□ -2.29
NUP98P52948 RPL30P1-201ENST00000488676 339 ntBASIC0.73□□□□□ -2.29
NUP98P52948 RNU6-1225P-201ENST00000516336 65 ntBASIC0.73□□□□□ -2.29
NUP98P52948 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP98P52948 AC012414.6-201ENST00000568241 401 ntBASIC0.73□□□□□ -2.29
NUP98P52948 AC137800.2-201ENST00000574375 120 ntBASIC0.73□□□□□ -2.29
NUP98P52948 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.73□□□□□ -2.29
NUP98P52948 MIR4293-201ENST00000584305 78 ntBASIC0.73□□□□□ -2.29
NUP98P52948 AC021171.1-201ENST00000603137 706 ntBASIC0.73□□□□□ -2.29
NUP98P52948 AC112220.2-201ENST00000605513 533 ntBASIC0.73□□□□□ -2.29
NUP98P52948 AL159153.1-201ENST00000619688 317 ntBASIC0.73□□□□□ -2.29
NUP98P52948 RNA5SP347-201ENST00000362445 119 ntBASIC0.73□□□□□ -2.29
NUP98P52948 RNU6-112P-201ENST00000363599 104 ntBASIC0.73□□□□□ -2.29
NUP98P52948 SNORD116-20-201ENST00000384529 92 ntBASIC0.73□□□□□ -2.29
NUP98P52948 SNORA48.1-201ENST00000390879 135 ntBASIC0.73□□□□□ -2.29
NUP98P52948 MTND3P20-201ENST00000407663 186 ntBASIC0.73□□□□□ -2.29
NUP98P52948 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP98P52948 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP98P52948 MTCO3P43-201ENST00000440974 771 ntBASIC0.73□□□□□ -2.29
NUP98P52948 AL353752.1-201ENST00000454946 260 ntBASIC0.73□□□□□ -2.29
NUP98P52948 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP98P52948 RPL39P28-201ENST00000465655 155 ntBASIC0.73□□□□□ -2.29
NUP98P52948 RPL26P26-201ENST00000480251 434 ntBASIC0.73□□□□□ -2.29
NUP98P52948 MTND2P33-201ENST00000506452 1031 ntBASIC0.73□□□□□ -2.29
NUP98P52948 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.73□□□□□ -2.29
NUP98P52948 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.73□□□□□ -2.29
NUP98P52948 AL358072.1-201ENST00000604156 575 ntBASIC0.73□□□□□ -2.29
NUP98P52948 AC099654.5-201ENST00000636479 350 ntBASIC0.73□□□□□ -2.29
NUP98P52948 MIR3529-201ENST00000637713 78 ntBASIC0.73□□□□□ -2.29
NUP98P52948 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
NUP98P52948 LINC02555-201ENST00000563933 1951 ntBASIC0.72□□□□□ -2.29
NUP98P52948 RNU6-743P-201ENST00000364151 106 ntBASIC0.72□□□□□ -2.29
NUP98P52948 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
NUP98P52948 RNU6-968P-201ENST00000384076 107 ntBASIC0.72□□□□□ -2.29
NUP98P52948 RNU6-16P-201ENST00000384385 107 ntBASIC0.72□□□□□ -2.29
NUP98P52948 AL357139.1-201ENST00000407792 426 ntBASIC0.72□□□□□ -2.29
NUP98P52948 TOMM22P2-201ENST00000430735 237 ntBASIC0.72□□□□□ -2.29
NUP98P52948 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.72□□□□□ -2.29
NUP98P52948 AL353718.1-201ENST00000451028 517 ntBASIC0.72□□□□□ -2.29
NUP98P52948 AC093899.1-201ENST00000457984 376 ntBASIC0.72□□□□□ -2.29
NUP98P52948 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.72□□□□□ -2.29
NUP98P52948 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC0.72□□□□□ -2.29
NUP98P52948 MIR1273C-201ENST00000578669 77 ntBASIC0.72□□□□□ -2.29
NUP98P52948 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.72□□□□□ -2.29
NUP98P52948 AC091925.1-201ENST00000623204 462 ntBASIC0.72□□□□□ -2.29
NUP98P52948 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.71□□□□□ -2.3
NUP98P52948 snoZ40.1-201ENST00000364540 72 ntBASIC0.71□□□□□ -2.3
NUP98P52948 RNU6-1187P-201ENST00000364771 110 ntBASIC0.71□□□□□ -2.3
NUP98P52948 RNU6-26P-201ENST00000383985 107 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms