Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 RNU6-490P-201ENST00000362985 107 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-1141P-201ENST00000364520 107 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 SNORD42.2-201ENST00000365570 69 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 CD24P4-201ENST00000382840 243 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-622P-201ENST00000384272 103 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 MIR544A-201ENST00000384855 91 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 U3.19-201ENST00000390893 196 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-1304P-201ENST00000411374 106 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 AC078809.1-201ENST00000427601 140 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 BX510359.1-201ENST00000456973 237 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 AP001025.1-201ENST00000486139 332 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU2-27P-201ENST00000516185 142 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 RN7SKP57-201ENST00000517248 293 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 AC005000.2-201ENST00000605468 310 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 AC097372.5-201ENST00000623665 376 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 AL513302.2-201ENST00000562313 1842 ntBASIC3.4□□□□□ -1.87
PCDHGA3Q9Y5H0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 SNORD114-19-201ENST00000363072 75 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 SNORA63-201ENST00000363450 132 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-1059P-201ENST00000363752 98 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 AP002088.1-201ENST00000382740 395 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 Y_RNA.395-201ENST00000383945 109 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-890P-201ENST00000384121 107 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 RN7SKP111-201ENST00000410349 271 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-55P-201ENST00000411092 107 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 RPL21P10-201ENST00000463521 490 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 AC068781.1-201ENST00000488231 618 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 AC092185.1-201ENST00000491371 97 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 RPL22P13-201ENST00000493291 347 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-470P-201ENST00000515954 104 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 SCARNA13-201ENST00000516672 275 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-1213P-201ENST00000517075 94 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 MIR5696-201ENST00000578474 85 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 UCA1.1-201ENST00000620952 75 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 AC092608.2-201ENST00000624427 218 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 ZNF299P-201ENST00000406845 1804 ntBASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PCDHGA3Q9Y5H0 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-1010P-201ENST00000362757 107 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-692P-201ENST00000384496 107 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 AC138623.1-201ENST00000418060 216 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 TRIAP1P1-201ENST00000427062 225 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 RPL39P29-201ENST00000447779 157 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 RPS27P29-201ENST00000463110 252 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 AC010401.1-201ENST00000463867 348 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 AC016632.1-201ENST00000503994 196 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 SCARNA16.2-201ENST00000516520 172 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 SNORA70.18-201ENST00000516696 98 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-579P-201ENST00000516879 102 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 TGIF1P1-201ENST00000558095 802 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 RPS15AP11-201ENST00000594193 385 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 RPL23AP78-201ENST00000599928 470 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 YPEL5P2-201ENST00000605553 359 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 AP000560.1-201ENST00000624150 1937 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 MTND5P30-201ENST00000452896 1731 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 MTND4P27-201ENST00000450813 1354 ntBASIC3.38□□□□□ -1.87
PCDHGA3Q9Y5H0 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 AL356274.2-201ENST00000624379 3752 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 AC092268.1-201ENST00000342691 405 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU4-35P-201ENST00000362588 141 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 Y_RNA.123-201ENST00000363338 102 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 U3.6-201ENST00000363622 211 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-1083P-201ENST00000384022 107 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 RNU6-331P-201ENST00000384724 107 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 MTCYBP2-201ENST00000407745 171 ntBASIC3.37□□□□□ -1.87
PCDHGA3Q9Y5H0 RN7SKP61-201ENST00000410642 295 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms