Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 H3F3AP1-201ENST00000559984 334 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 MIR4286-201ENST00000580651 93 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 FTLP6-201ENST00000355274 422 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-740P-201ENST00000364734 105 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-1286P-201ENST00000383871 107 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-378P-201ENST00000384324 107 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 Y_RNA.506-201ENST00000384494 102 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 MIR487A-201ENST00000385009 80 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 MIR493-201ENST00000385254 89 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 SNORA53-201ENST00000391141 249 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 RPS4XP3-201ENST00000398541 413 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 SNORD12B-201ENST00000410433 91 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-651P-201ENST00000411040 105 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 Y_RNA.626-201ENST00000411288 95 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 AC243964.1-201ENST00000441814 261 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 RNU7-120P-201ENST00000459334 63 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 SNORD116-28-201ENST00000516123 91 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 RNU1-103P-201ENST00000516502 125 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 AP004607.1-201ENST00000524456 203 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 LINC00933-203ENST00000559812 219 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 AC024153.1-201ENST00000603103 365 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 RMST_6.1-201ENST00000611980 203 ntBASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
SEC61A2Q9H9S3 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-858P-201ENST00000362436 107 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 RNU1-140P-201ENST00000365040 165 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-47P-201ENST00000383866 107 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-213P-201ENST00000384051 104 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 SNORD63-201ENST00000384262 68 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-125P-201ENST00000384505 107 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-541P-201ENST00000384709 110 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 HLFP1-201ENST00000402375 499 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 AL159169.1-201ENST00000421119 127 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 AP000907.1-201ENST00000428428 510 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 HMGN2P21-201ENST00000447764 270 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 SSXP4-201ENST00000451349 245 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 Y_RNA.703-201ENST00000516846 111 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 RNU7-110P-201ENST00000516891 62 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 AC022695.1-201ENST00000522089 237 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.41□□□□□ -1.86
SEC61A2Q9H9S3 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SEC61A2Q9H9S3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SEC61A2Q9H9S3 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
SEC61A2Q9H9S3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SEC61A2Q9H9S3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SEC61A2Q9H9S3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.4□□□□□ -1.86
SEC61A2Q9H9S3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.4□□□□□ -1.86
SEC61A2Q9H9S3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SEC61A2Q9H9S3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
SEC61A2Q9H9S3 SNORD56.1-201ENST00000362913 68 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-682P-201ENST00000363843 106 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 SNORA29-201ENST00000384183 140 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 SNORD116-20-201ENST00000384529 92 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 MIR518D-201ENST00000385014 87 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 MIR153-2-201ENST00000385225 87 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 MIR134-201ENST00000385258 73 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 RN7SKP177-201ENST00000410567 355 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 RNU6-1245P-201ENST00000411130 106 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 RPL21P66-201ENST00000426566 466 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 AL606753.1-201ENST00000427435 87 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 WARS2P1-201ENST00000429678 537 ntBASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SEC61A2Q9H9S3 SEPT14P8-201ENST00000508026 178 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms