Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AL358944.1-201ENST00000528537 144 ntBASIC6.13□□□□□ -1.43
RNF39Q9H2S5 AC069240.1-201ENST00000548774 375 ntBASIC6.13□□□□□ -1.43
RNF39Q9H2S5 MIR1269B-201ENST00000580405 75 ntBASIC6.13□□□□□ -1.43
RNF39Q9H2S5 MIR6719-201ENST00000622428 87 ntBASIC6.13□□□□□ -1.43
RNF39Q9H2S5 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.13□□□□□ -1.43
RNF39Q9H2S5 TTC41P-205ENST00000551270 3963 ntBASIC6.13□□□□□ -1.43
RNF39Q9H2S5 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF39Q9H2S5 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RNF39Q9H2S5 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
RNF39Q9H2S5 Y_RNA.36-201ENST00000362602 112 ntBASIC6.12□□□□□ -1.43
RNF39Q9H2S5 SNORD1C-201ENST00000363315 78 ntBASIC6.12□□□□□ -1.43
RNF39Q9H2S5 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RNF39Q9H2S5 RNU1-136P-201ENST00000384181 164 ntBASIC6.12□□□□□ -1.43
RNF39Q9H2S5 RNU6-171P-201ENST00000384354 107 ntBASIC6.12□□□□□ -1.43
RNF39Q9H2S5 RNA5SP251-201ENST00000410614 137 ntBASIC6.12□□□□□ -1.43
RNF39Q9H2S5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF39Q9H2S5 PTMAP3-201ENST00000447474 330 ntBASIC6.12□□□□□ -1.43
RNF39Q9H2S5 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RNF39Q9H2S5 NIP7P2-201ENST00000485801 544 ntBASIC6.12□□□□□ -1.43
RNF39Q9H2S5 AC110768.1-201ENST00000509222 400 ntBASIC6.12□□□□□ -1.43
RNF39Q9H2S5 MIR449C-201ENST00000516047 92 ntBASIC6.12□□□□□ -1.43
RNF39Q9H2S5 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF39Q9H2S5 AC006115.2-201ENST00000596823 202 ntBASIC6.12□□□□□ -1.43
RNF39Q9H2S5 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC6.12□□□□□ -1.43
RNF39Q9H2S5 AL512598.1-201ENST00000610158 273 ntBASIC6.12□□□□□ -1.43
RNF39Q9H2S5 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.12□□□□□ -1.43
RNF39Q9H2S5 MFSD8-236ENST00000641509 4050 ntBASIC6.12□□□□□ -1.43
RNF39Q9H2S5 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
RNF39Q9H2S5 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RNF39Q9H2S5 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RNF39Q9H2S5 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF39Q9H2S5 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF39Q9H2S5 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF39Q9H2S5 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF39Q9H2S5 ICE2P2-201ENST00000483823 2787 ntBASIC6.11□□□□□ -1.43
RNF39Q9H2S5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
RNF39Q9H2S5 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF39Q9H2S5 U3.2-201ENST00000362981 210 ntBASIC6.11□□□□□ -1.43
RNF39Q9H2S5 Y_RNA.267-201ENST00000364679 109 ntBASIC6.11□□□□□ -1.43
RNF39Q9H2S5 SNORD31B-201ENST00000364977 69 ntBASIC6.11□□□□□ -1.43
RNF39Q9H2S5 snoU2-30.1-201ENST00000365012 70 ntBASIC6.11□□□□□ -1.43
RNF39Q9H2S5 CRIP1P1-201ENST00000427567 185 ntBASIC6.11□□□□□ -1.43
RNF39Q9H2S5 RPS15AP28-201ENST00000435088 386 ntBASIC6.11□□□□□ -1.43
RNF39Q9H2S5 AC104027.1-201ENST00000521887 300 ntBASIC6.11□□□□□ -1.43
RNF39Q9H2S5 AC067747.1-201ENST00000608026 250 ntBASIC6.11□□□□□ -1.43
RNF39Q9H2S5 MIR8080-201ENST00000622224 89 ntBASIC6.11□□□□□ -1.43
RNF39Q9H2S5 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF39Q9H2S5 AL137790.1-201ENST00000634283 177 ntBASIC6.11□□□□□ -1.43
RNF39Q9H2S5 MIR6841-201ENST00000637129 72 ntBASIC6.11□□□□□ -1.43
RNF39Q9H2S5 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RNF39Q9H2S5 AC092070.2-203ENST00000598377 3644 ntBASIC6.11□□□□□ -1.43
RNF39Q9H2S5 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.11□□□□□ -1.43
RNF39Q9H2S5 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RNF39Q9H2S5 AC245060.5-201ENST00000610778 3293 ntBASIC6.11□□□□□ -1.43
RNF39Q9H2S5 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC6.11□□□□□ -1.43
RNF39Q9H2S5 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
RNF39Q9H2S5 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RNF39Q9H2S5 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 AC110716.2-201ENST00000563865 3945 ntBASIC6.1□□□□□ -1.43
RNF39Q9H2S5 AC015818.7-201ENST00000428754 109 ntBASIC6.1□□□□□ -1.43
RNF39Q9H2S5 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 BX510359.5-201ENST00000515651 304 ntBASIC6.1□□□□□ -1.43
RNF39Q9H2S5 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 YWHAEP2-201ENST00000580066 112 ntBASIC6.1□□□□□ -1.43
RNF39Q9H2S5 YWHAEP3-201ENST00000582767 121 ntBASIC6.1□□□□□ -1.43
RNF39Q9H2S5 IMMP1LP3-201ENST00000604197 224 ntBASIC6.1□□□□□ -1.43
RNF39Q9H2S5 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 AL161912.2-201ENST00000565707 3007 ntBASIC6.1□□□□□ -1.43
RNF39Q9H2S5 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 USP8P1-201ENST00000494673 3183 ntBASIC6.1□□□□□ -1.43
RNF39Q9H2S5 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.1□□□□□ -1.43
RNF39Q9H2S5 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RNF39Q9H2S5 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.09□□□□□ -1.43
RNF39Q9H2S5 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF39Q9H2S5 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF39Q9H2S5 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF39Q9H2S5 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC6.09□□□□□ -1.43
RNF39Q9H2S5 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.09□□□□□ -1.43
RNF39Q9H2S5 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
RNF39Q9H2S5 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF39Q9H2S5 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF39Q9H2S5 RNA5SP319-201ENST00000362768 119 ntBASIC6.09□□□□□ -1.43
RNF39Q9H2S5 RNU6-811P-201ENST00000384069 107 ntBASIC6.09□□□□□ -1.43
RNF39Q9H2S5 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF39Q9H2S5 RPS26P47-201ENST00000427219 348 ntBASIC6.09□□□□□ -1.43
RNF39Q9H2S5 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 170.7 ms