Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MIR3065-201ENST00000390137 79 ntBASIC4.93□□□□□ -1.62
PHOX2BQ99453 SNORA75.5-201ENST00000391291 81 ntBASIC4.93□□□□□ -1.62
PHOX2BQ99453 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PHOX2BQ99453 PTMAP2-201ENST00000397627 327 ntBASIC4.93□□□□□ -1.62
PHOX2BQ99453 AL357134.1-201ENST00000445848 426 ntBASIC4.93□□□□□ -1.62
PHOX2BQ99453 RPS3P1-201ENST00000456781 192 ntBASIC4.93□□□□□ -1.62
PHOX2BQ99453 RPL21P126-201ENST00000470049 478 ntBASIC4.93□□□□□ -1.62
PHOX2BQ99453 RAC1P5-201ENST00000512182 576 ntBASIC4.93□□□□□ -1.62
PHOX2BQ99453 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC4.93□□□□□ -1.62
PHOX2BQ99453 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.93□□□□□ -1.62
PHOX2BQ99453 AC233702.9-201ENST00000581528 203 ntBASIC4.93□□□□□ -1.62
PHOX2BQ99453 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PHOX2BQ99453 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PHOX2BQ99453 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PHOX2BQ99453 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PHOX2BQ99453 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
PHOX2BQ99453 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.93□□□□□ -1.62
PHOX2BQ99453 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PHOX2BQ99453 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
PHOX2BQ99453 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC4.93□□□□□ -1.62
PHOX2BQ99453 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
PHOX2BQ99453 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
PHOX2BQ99453 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.92□□□□□ -1.62
PHOX2BQ99453 RNU6-1180P-201ENST00000364935 107 ntBASIC4.92□□□□□ -1.62
PHOX2BQ99453 RNU4-43P-201ENST00000410628 137 ntBASIC4.92□□□□□ -1.62
PHOX2BQ99453 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.92□□□□□ -1.62
PHOX2BQ99453 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC4.92□□□□□ -1.62
PHOX2BQ99453 NDUFS5P3-201ENST00000450668 321 ntBASIC4.92□□□□□ -1.62
PHOX2BQ99453 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC4.92□□□□□ -1.62
PHOX2BQ99453 AC092991.1-201ENST00000477176 376 ntBASIC4.92□□□□□ -1.62
PHOX2BQ99453 RNU1-61P-201ENST00000516107 151 ntBASIC4.92□□□□□ -1.62
PHOX2BQ99453 RNU2-44P-201ENST00000516795 194 ntBASIC4.92□□□□□ -1.62
PHOX2BQ99453 RNU2-56P-201ENST00000516826 190 ntBASIC4.92□□□□□ -1.62
PHOX2BQ99453 MIR3200-201ENST00000580767 85 ntBASIC4.92□□□□□ -1.62
PHOX2BQ99453 AC025754.2-201ENST00000606491 432 ntBASIC4.92□□□□□ -1.62
PHOX2BQ99453 AP005432.2-201ENST00000608162 586 ntBASIC4.92□□□□□ -1.62
PHOX2BQ99453 AC244107.2-201ENST00000611773 76 ntBASIC4.92□□□□□ -1.62
PHOX2BQ99453 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
PHOX2BQ99453 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
PHOX2BQ99453 AL159152.1-201ENST00000635019 2587 ntBASIC4.92□□□□□ -1.62
PHOX2BQ99453 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.92□□□□□ -1.62
PHOX2BQ99453 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
PHOX2BQ99453 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.91□□□□□ -1.62
PHOX2BQ99453 AL136164.4-201ENST00000625013 2135 ntBASIC4.91□□□□□ -1.62
PHOX2BQ99453 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PHOX2BQ99453 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PHOX2BQ99453 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PHOX2BQ99453 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PHOX2BQ99453 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.91□□□□□ -1.62
PHOX2BQ99453 UBBP2-201ENST00000376781 231 ntBASIC4.91□□□□□ -1.62
PHOX2BQ99453 U1.1-201ENST00000384101 164 ntBASIC4.91□□□□□ -1.62
PHOX2BQ99453 Y_RNA.572-201ENST00000384757 98 ntBASIC4.91□□□□□ -1.62
PHOX2BQ99453 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
PHOX2BQ99453 SNORA48.5-201ENST00000391143 135 ntBASIC4.91□□□□□ -1.62
PHOX2BQ99453 CYCSP19-201ENST00000411715 316 ntBASIC4.91□□□□□ -1.62
PHOX2BQ99453 AC016831.4-201ENST00000438302 307 ntBASIC4.91□□□□□ -1.62
PHOX2BQ99453 AL354714.3-201ENST00000447284 493 ntBASIC4.91□□□□□ -1.62
PHOX2BQ99453 AC073073.1-201ENST00000493920 463 ntBASIC4.91□□□□□ -1.62
PHOX2BQ99453 FCF1P8-201ENST00000510322 597 ntBASIC4.91□□□□□ -1.62
PHOX2BQ99453 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.91□□□□□ -1.62
PHOX2BQ99453 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.91□□□□□ -1.62
PHOX2BQ99453 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.91□□□□□ -1.62
PHOX2BQ99453 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PHOX2BQ99453 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
PHOX2BQ99453 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
PHOX2BQ99453 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
PHOX2BQ99453 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.9□□□□□ -1.62
PHOX2BQ99453 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PHOX2BQ99453 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PHOX2BQ99453 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
PHOX2BQ99453 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
PHOX2BQ99453 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PHOX2BQ99453 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PHOX2BQ99453 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
PHOX2BQ99453 RNU4-15P-201ENST00000362613 141 ntBASIC4.9□□□□□ -1.63
PHOX2BQ99453 SNORA18.2-201ENST00000383865 132 ntBASIC4.9□□□□□ -1.63
PHOX2BQ99453 SNORA79-201ENST00000408376 140 ntBASIC4.9□□□□□ -1.63
PHOX2BQ99453 YME1L1P1-201ENST00000429435 297 ntBASIC4.9□□□□□ -1.63
PHOX2BQ99453 HSPE1P13-201ENST00000451143 297 ntBASIC4.9□□□□□ -1.63
PHOX2BQ99453 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.9□□□□□ -1.63
PHOX2BQ99453 CYCTP-201ENST00000504253 315 ntBASIC4.9□□□□□ -1.63
PHOX2BQ99453 RNA5SP392-201ENST00000516905 112 ntBASIC4.9□□□□□ -1.63
PHOX2BQ99453 Y_RNA.757-201ENST00000578934 114 ntBASIC4.9□□□□□ -1.63
PHOX2BQ99453 HMGN2P15-201ENST00000585707 270 ntBASIC4.9□□□□□ -1.63
PHOX2BQ99453 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.9□□□□□ -1.63
PHOX2BQ99453 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC4.9□□□□□ -1.63
PHOX2BQ99453 AL670379.2-201ENST00000604983 252 ntBASIC4.9□□□□□ -1.63
PHOX2BQ99453 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.63
PHOX2BQ99453 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PHOX2BQ99453 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PHOX2BQ99453 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
PHOX2BQ99453 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
PHOX2BQ99453 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
PHOX2BQ99453 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.89□□□□□ -1.63
PHOX2BQ99453 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.89□□□□□ -1.63
PHOX2BQ99453 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
PHOX2BQ99453 AL672167.1-204ENST00000641875 3017 ntBASIC4.89□□□□□ -1.63
PHOX2BQ99453 AC010733.2-201ENST00000589496 5702 ntBASIC4.89□□□□□ -1.63
PHOX2BQ99453 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.89□□□□□ -1.63
PHOX2BQ99453 SPRR2C-201ENST00000290702 219 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms