Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 CYCSP49-201ENST00000420810 319 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 AC104333.2-201ENST00000422630 192 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 RPL39P29-201ENST00000447779 157 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 HMGB3P8-201ENST00000449709 577 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 snoU109.2-201ENST00000459316 135 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 AC139453.3-201ENST00000493276 369 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 HMGB1P22-201ENST00000505315 124 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 AP005432.2-201ENST00000608162 586 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 AC112484.5-201ENST00000624189 228 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 AC126323.6-202ENST00000568092 3511 ntBASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CNTNAP3BQ96NU0 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 RNU6-766P-201ENST00000362478 107 ntBASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 SNORD32A-201ENST00000364805 84 ntBASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 RNA5SP22-201ENST00000365393 109 ntBASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 RNA5SP366-201ENST00000365454 123 ntBASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 SNORA72.4-201ENST00000384174 132 ntBASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 AL512604.1-201ENST00000404812 257 ntBASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 RPL23AP95-201ENST00000426806 265 ntBASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 AL445584.1-201ENST00000431451 330 ntBASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 AC112220.1-201ENST00000434628 355 ntBASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 AC243964.1-201ENST00000441814 261 ntBASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 Y_RNA.649-201ENST00000459077 103 ntBASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 RN7SL810P-201ENST00000493031 276 ntBASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 AC006199.1-201ENST00000548728 219 ntBASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 AC019176.2-201ENST00000611579 315 ntBASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
CNTNAP3BQ96NU0 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
CNTNAP3BQ96NU0 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.53□□□□□ -1.69
CNTNAP3BQ96NU0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 AC138915.1-201ENST00000565427 1685 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 Y_RNA.328-201ENST00000365208 113 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 SNORD78.1-201ENST00000390866 65 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 U6atac.2-201ENST00000408644 118 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 U3.40-201ENST00000408706 208 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 AC009237.8-201ENST00000445492 379 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 RN7SKP12-201ENST00000516275 143 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 SNORA31.8-201ENST00000516327 108 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 RNA5SP392-201ENST00000516905 112 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 RNU2-12P-201ENST00000517216 168 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 AC090142.3-201ENST00000519012 385 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 AP004607.1-201ENST00000524456 203 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 MIR5571-201ENST00000577998 113 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 SNORA51-201ENST00000606420 132 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 U6.99-201ENST00000637524 83 ntBASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
CNTNAP3BQ96NU0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 U8.1-201ENST00000362843 134 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 Y_RNA.229-201ENST00000364347 113 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 RNU6-142P-201ENST00000384019 107 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 SNORA70.10-201ENST00000384515 134 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 RNU6-1152P-201ENST00000384576 107 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 SNORA77-201ENST00000408716 125 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 AC096649.2-201ENST00000416186 393 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 AC011998.1-201ENST00000433403 117 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 SNRPEP9-201ENST00000436794 238 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 RPS29P9-201ENST00000440360 171 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 HMGN2P32-201ENST00000444648 269 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 RN7SKP46-201ENST00000515942 234 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 RNU5F-2P-201ENST00000516066 82 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 SNORA70.16-201ENST00000516390 95 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 SCARNA20.4-201ENST00000516969 131 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 snoMBII-202.2-201ENST00000517263 86 ntBASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.51□□□□□ -1.69
CNTNAP3BQ96NU0 AC022726.1-201ENST00000587475 207 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms