Protein–RNA interactions for Protein: Q92729

PTPRU, Receptor-type tyrosine-protein phosphatase U, humanhuman

Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRUQ92729 Y_RNA.22-201ENST00000362492 102 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 RNU1-42P-201ENST00000364033 160 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 RNU6-116P-201ENST00000384042 109 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 RNU6-174P-201ENST00000410406 106 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 RPL21P90-201ENST00000415692 466 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.31□□□□□ -2.04
PTPRUQ92729 AL022238.1-201ENST00000442557 355 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.31□□□□□ -2.04
PTPRUQ92729 RNU7-182P-201ENST00000459009 62 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 AL121594.1-201ENST00000475906 575 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.31□□□□□ -2.04
PTPRUQ92729 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 ARL2BPP4-201ENST00000506854 471 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC2.31□□□□□ -2.04
PTPRUQ92729 AC010493.1-201ENST00000513479 292 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 RNA5SP112-201ENST00000515937 99 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 RNA5SP220-201ENST00000516298 104 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 ACA59.2-201ENST00000517061 156 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.31□□□□□ -2.04
PTPRUQ92729 AC104581.2-201ENST00000572227 430 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 AC012213.3-201ENST00000577199 777 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 MIR3199-1-201ENST00000582434 88 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PTPRUQ92729 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 SEPT14P19-203ENST00000633205 211 ntBASIC2.31□□□□□ -2.04
PTPRUQ92729 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PTPRUQ92729 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PTPRUQ92729 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
PTPRUQ92729 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
PTPRUQ92729 RNU6-181P-201ENST00000363225 107 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 Y_RNA.576-201ENST00000384781 102 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 MIR1-2-201ENST00000384961 85 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 RNU6-1328P-201ENST00000410938 106 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 HMGB3P2-201ENST00000411913 584 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 USP9YP29-201ENST00000445112 563 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 AL583843.1-201ENST00000456070 346 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 snoU109.2-201ENST00000459316 135 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 AC090096.1-201ENST00000489168 390 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 HMGB1P30-201ENST00000492455 606 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 SNORA31.6-201ENST00000516241 130 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 RNU5B-3P-201ENST00000516601 115 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 RNU6-445P-201ENST00000516949 107 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.3□□□□□ -2.04
PTPRUQ92729 AC135279.1-201ENST00000543493 504 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.3□□□□□ -2.04
PTPRUQ92729 AL391840.1-201ENST00000571144 367 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 AC090616.3-201ENST00000582184 217 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PTPRUQ92729 AC068790.2-201ENST00000602601 557 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 AL021997.1-201ENST00000605757 193 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
PTPRUQ92729 DUXAP9-208ENST00000622815 614 ntBASIC2.3□□□□□ -2.04
PTPRUQ92729 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.3□□□□□ -2.04
PTPRUQ92729 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
PTPRUQ92729 AC135776.4-201ENST00000624300 1904 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
PTPRUQ92729 Y_RNA.77-201ENST00000362962 107 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 RNU6-371P-201ENST00000364283 108 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 SNORD115-7-201ENST00000365306 82 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 RNU6-53P-201ENST00000365367 106 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PTPRUQ92729 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.29□□□□□ -2.04
PTPRUQ92729 AC097463.2-201ENST00000421074 142 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.29□□□□□ -2.04
PTPRUQ92729 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.29□□□□□ -2.04
PTPRUQ92729 AC004383.1-201ENST00000438135 289 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC2.29□□□□□ -2.04
PTPRUQ92729 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.29□□□□□ -2.04
PTPRUQ92729 PPP1R2P5-201ENST00000457256 603 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 RPL31P3-201ENST00000458430 332 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.29□□□□□ -2.04
PTPRUQ92729 AC022493.1-201ENST00000492984 337 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.29□□□□□ -2.04
PTPRUQ92729 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.29□□□□□ -2.04
PTPRUQ92729 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC2.29□□□□□ -2.04
PTPRUQ92729 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.29□□□□□ -2.04
PTPRUQ92729 MIR4528-201ENST00000577763 90 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 MIR5571-201ENST00000577998 113 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 AL078603.1-201ENST00000603824 313 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 AC069294.1-201ENST00000608397 350 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 AC006566.1-201ENST00000608943 513 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 AC096772.1-201ENST00000609146 564 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 uc_338.11-201ENST00000619132 160 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.29□□□□□ -2.04
PTPRUQ92729 AC022079.1-201ENST00000621546 602 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 AC093648.1-201ENST00000623546 606 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 AC092656.1-203ENST00000624134 423 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 MTND5P35-201ENST00000557537 1720 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 CDC27P3-201ENST00000635418 1910 ntBASIC2.29□□□□□ -2.04
PTPRUQ92729 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
PTPRUQ92729 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PTPRUQ92729 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
PTPRUQ92729 SNORD48-201ENST00000364953 64 ntBASIC2.28□□□□□ -2.04
PTPRUQ92729 Y_RNA.374-201ENST00000365606 101 ntBASIC2.28□□□□□ -2.04
PTPRUQ92729 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
PTPRUQ92729 RNU6-248P-201ENST00000410720 107 ntBASIC2.28□□□□□ -2.04
PTPRUQ92729 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.28□□□□□ -2.04
PTPRUQ92729 AC133104.1-201ENST00000429100 218 ntBASIC2.28□□□□□ -2.04
PTPRUQ92729 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 226.5 ms