Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
HIPK4Q8NE63 Z75746.1-201ENST00000440243 2080 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AC093010.3-201ENST00000570269 15214 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 MIR30E-201ENST00000362104 92 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 RNU6-858P-201ENST00000362436 107 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 RNU1-76P-201ENST00000362903 159 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AP002088.1-201ENST00000382740 395 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 Y_RNA.461-201ENST00000384263 103 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 RNU6-611P-201ENST00000384276 104 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 Y_RNA.476-201ENST00000384347 108 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 RNU6-1245P-201ENST00000411130 106 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AL356095.1-201ENST00000417217 199 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 EIF1AXP1-201ENST00000419267 435 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 RPL23AP82-202ENST00000427528 469 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AP000907.1-201ENST00000428428 510 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 USP9YP16-201ENST00000430287 407 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AC009296.1-201ENST00000443146 155 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 USP9YP23-201ENST00000455085 407 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 snoU13.28-201ENST00000459235 104 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 RNU7-87P-201ENST00000459343 62 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 MED28P2-201ENST00000475771 317 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AP001025.1-201ENST00000486139 332 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AF186996.7-201ENST00000492781 209 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AC010469.2-201ENST00000496412 480 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 ANXA2P1-201ENST00000505539 926 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 RNY3P15-201ENST00000516297 97 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AC008011.1-201ENST00000545989 227 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 AC078899.3-201ENST00000599065 212 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 MIR6076-201ENST00000617521 113 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 MIR492-201ENST00000638676 116 ntBASIC3.53□□□□□ -1.84
HIPK4Q8NE63 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
HIPK4Q8NE63 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
HIPK4Q8NE63 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
HIPK4Q8NE63 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 Y_RNA.19-201ENST00000362462 99 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 Y_RNA.105-201ENST00000363182 111 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 SNORA70.2-201ENST00000364506 135 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 Y_RNA.376-201ENST00000365638 108 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 RPL21P65-201ENST00000406094 466 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AC006989.1-201ENST00000427212 131 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AL353705.4-201ENST00000449661 238 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 RPL32P34-201ENST00000486380 400 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AC104564.1-201ENST00000493028 407 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 SNORA40.15-201ENST00000516884 107 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 MIR2116-201ENST00000517221 80 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AC023157.2-201ENST00000540596 141 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AP002770.2-201ENST00000543613 532 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AC009163.5-201ENST00000575421 637 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 SNORA51-201ENST00000606420 132 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 MIR6867-201ENST00000610636 67 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AC083809.1-201ENST00000615051 472 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AC002076.2-201ENST00000617362 122 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 AC130454.1-201ENST00000622948 401 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 ADAM3A-203ENST00000461344 2157 ntBASIC3.52□□□□□ -1.85
HIPK4Q8NE63 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.52□□□□□ -1.85
HIPK4Q8NE63 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 RNU6-379P-201ENST00000363813 104 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 U3.13-201ENST00000364804 214 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.51□□□□□ -1.85
HIPK4Q8NE63 Y_RNA.458-201ENST00000384240 102 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 RNU6-17P-201ENST00000384245 107 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 Y_RNA.483-201ENST00000384380 101 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 RNU6-18P-201ENST00000384527 107 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HIPK4Q8NE63 RNU6-121P-201ENST00000410525 99 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 AL356968.1-201ENST00000416622 474 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.51□□□□□ -1.85
HIPK4Q8NE63 RPL21P40-201ENST00000428586 483 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 AL714022.1-201ENST00000439897 151 ntBASIC3.51□□□□□ -1.85
HIPK4Q8NE63 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.51□□□□□ -1.85
HIPK4Q8NE63 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms