Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MTND4P1-201ENST00000457501 1466 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AC138393.1-203ENST00000327086 343 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 Y_RNA.324-201ENST00000365165 102 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 RNU4-52P-201ENST00000384209 138 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 BTF3P7-201ENST00000407097 488 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 RNU2-40P-201ENST00000410833 196 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 RPS3AP44-201ENST00000425466 790 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AL121601.2-201ENST00000438019 707 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AC124916.1-201ENST00000444020 547 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AC080013.2-201ENST00000460866 323 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 CKS1BP2-201ENST00000497342 240 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-1281P-201ENST00000516223 105 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 RNU5B-3P-201ENST00000516601 115 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AC021269.2-201ENST00000532318 330 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 MDM2-233ENST00000545204 398 ntTSL 5 BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AC079598.5-201ENST00000547460 117 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 HMGB1P33-201ENST00000563485 527 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AC007229.1-201ENST00000590455 412 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AC004492.1-201ENST00000607036 742 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AC009233.1-201ENST00000616477 371 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 RMST_4.1-201ENST00000616886 107 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 SDR42E1P4-201ENST00000620894 481 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AC022418.1-201ENST00000624118 445 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 AP003400.5-201ENST00000624827 617 ntBASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
CCDC71LQ8N9Z2 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 RNU1-72P-201ENST00000362976 153 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 RNU4-66P-201ENST00000365199 138 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 RPS15AP28-201ENST00000435088 386 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 HMGB1P31-201ENST00000437242 427 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 RNA5SP233-201ENST00000459153 113 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 RPL7P43-201ENST00000478876 753 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AC068781.1-201ENST00000488231 618 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AC082651.2-201ENST00000496833 166 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 RNU4-29P-201ENST00000515943 174 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-835P-201ENST00000516974 104 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AP004607.1-201ENST00000524456 203 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AC078899.2-201ENST00000595282 212 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AC068790.6-201ENST00000602558 258 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AC006023.1-201ENST00000603944 259 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AL138963.2-201ENST00000605137 226 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AC021646.1-201ENST00000605469 484 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AC002044.1-201ENST00000606707 158 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 U2.17-201ENST00000611454 95 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AC024581.2-201ENST00000619986 252 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 AC244517.12-201ENST00000623581 663 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 SCARNA15.3-201ENST00000626315 122 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 SCARNA4.1-201ENST00000628597 123 ntBASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.89□□□□□ -2.11
CCDC71LQ8N9Z2 CENPCP1-201ENST00000533085 2578 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-37P-201ENST00000362692 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 Y_RNA.111-201ENST00000363248 100 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-1090P-201ENST00000364065 94 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-11P-201ENST00000364234 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-7-201ENST00000364784 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-8-201ENST00000365467 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-25P-201ENST00000383873 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-1-201ENST00000383898 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-48P-201ENST00000384161 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-36P-201ENST00000384172 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-4P-201ENST00000384205 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-5P-201ENST00000384238 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-3P-201ENST00000384314 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-16P-201ENST00000384385 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-15P-201ENST00000384534 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-2-201ENST00000384627 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-29P-201ENST00000384637 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 Y_RNA.554-201ENST00000384672 102 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-9-201ENST00000384776 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RNU6-33P-201ENST00000384793 107 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 RAP1BP3-201ENST00000407180 549 ntBASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.88□□□□□ -2.11
CCDC71LQ8N9Z2 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms