Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 AL137843.1-201ENST00000605078 385 ntBASIC3.64□□□□□ -1.83
RTN4RL1Q86UN2 AL138880.2-201ENST00000616214 239 ntBASIC3.64□□□□□ -1.83
RTN4RL1Q86UN2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RTN4RL1Q86UN2 AC006504.1-201ENST00000562493 3666 ntBASIC3.64□□□□□ -1.83
RTN4RL1Q86UN2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTN4RL1Q86UN2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.64□□□□□ -1.83
RTN4RL1Q86UN2 MTND5P7-201ENST00000413558 1798 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 Y_RNA.193-201ENST00000363979 102 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 RNY3P11-201ENST00000364153 102 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 Y_RNA.556-201ENST00000384677 113 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 RNU4-47P-201ENST00000410876 114 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 CHEK2P4-201ENST00000450340 246 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 OR2AQ1P-201ENST00000451972 200 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC079354.2-201ENST00000453523 154 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 RPL26P9-201ENST00000457466 433 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 RPL23AP14-201ENST00000468281 468 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC010655.3-201ENST00000478818 450 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 RNU6-911P-201ENST00000516523 104 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 Y_RNA.715-201ENST00000517082 110 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 EIF4BP1-201ENST00000554881 351 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC020914.4-201ENST00000597690 277 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 MIR6134-201ENST00000617606 109 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 U2.1-201ENST00000618978 145 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC073308.1-201ENST00000623696 305 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AP001148.1-201ENST00000624124 2359 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 ZNF72P-201ENST00000425869 1908 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 Y_RNA.106-201ENST00000363189 100 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 SNORD6-201ENST00000365444 73 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 RNU6-1109P-201ENST00000391187 107 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 SSXP4-201ENST00000451349 245 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 RN7SL93P-201ENST00000463035 293 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 AC006445.1-201ENST00000491925 405 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 RPL22P13-201ENST00000493291 347 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 RNU6-928P-201ENST00000516876 104 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 RPS29P30-201ENST00000600975 111 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 AC025946.2-201ENST00000603398 234 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 AC068831.7-201ENST00000616954 363 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 MIR4727-201ENST00000622232 55 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 Y_RNA.210-201ENST00000364161 110 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 RNU4-50P-201ENST00000364361 141 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 RNA5SP494-201ENST00000410653 129 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AC125238.1-201ENST00000448842 249 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 RNA5SP341-201ENST00000516261 117 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AC009812.2-201ENST00000517657 457 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AC110588.1-201ENST00000559699 137 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AC020895.1-201ENST00000595362 272 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AC024581.2-201ENST00000619986 252 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AC022149.2-201ENST00000621061 203 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 SCARNA15.3-201ENST00000626315 122 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 SCARNA4.1-201ENST00000628597 123 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AC009541.1-201ENST00000438279 2662 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 RNU6-942P-201ENST00000363002 107 ntBASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms