Protein–RNA interactions for Protein: Q86UN2

RTN4RL1, Reticulon-4 receptor-like 1, humanhuman

Predicted RBP Predictions only

Length 441 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL1Q86UN2 AL137843.1-201ENST00000605078 385 ntBASIC3.64□□□□□ -1.83
RTN4RL1Q86UN2 AL138880.2-201ENST00000616214 239 ntBASIC3.64□□□□□ -1.83
RTN4RL1Q86UN2 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RTN4RL1Q86UN2 AC006504.1-201ENST00000562493 3666 ntBASIC3.64□□□□□ -1.83
RTN4RL1Q86UN2 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RTN4RL1Q86UN2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.64□□□□□ -1.83
RTN4RL1Q86UN2 MTND5P7-201ENST00000413558 1798 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 Y_RNA.193-201ENST00000363979 102 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 RNY3P11-201ENST00000364153 102 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 Y_RNA.556-201ENST00000384677 113 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 RNU4-47P-201ENST00000410876 114 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 CHEK2P4-201ENST00000450340 246 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 OR2AQ1P-201ENST00000451972 200 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC079354.2-201ENST00000453523 154 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 RPL26P9-201ENST00000457466 433 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 RPL23AP14-201ENST00000468281 468 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC010655.3-201ENST00000478818 450 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 RNU6-911P-201ENST00000516523 104 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 Y_RNA.715-201ENST00000517082 110 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 EIF4BP1-201ENST00000554881 351 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC020914.4-201ENST00000597690 277 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 MIR6134-201ENST00000617606 109 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 U2.1-201ENST00000618978 145 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AC073308.1-201ENST00000623696 305 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 AP001148.1-201ENST00000624124 2359 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RTN4RL1Q86UN2 ZNF72P-201ENST00000425869 1908 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 Y_RNA.106-201ENST00000363189 100 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 SNORD6-201ENST00000365444 73 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 RNU6-1109P-201ENST00000391187 107 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 SSXP4-201ENST00000451349 245 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 RN7SL93P-201ENST00000463035 293 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 AC006445.1-201ENST00000491925 405 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 RPL22P13-201ENST00000493291 347 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 RNU6-928P-201ENST00000516876 104 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 RPS29P30-201ENST00000600975 111 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 AC025946.2-201ENST00000603398 234 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 AC068831.7-201ENST00000616954 363 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 MIR4727-201ENST00000622232 55 ntBASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RTN4RL1Q86UN2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 Y_RNA.210-201ENST00000364161 110 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 RNU4-50P-201ENST00000364361 141 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 RNA5SP494-201ENST00000410653 129 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AC125238.1-201ENST00000448842 249 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 RNA5SP341-201ENST00000516261 117 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AC009812.2-201ENST00000517657 457 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AC110588.1-201ENST00000559699 137 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AC020895.1-201ENST00000595362 272 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AC024581.2-201ENST00000619986 252 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AC022149.2-201ENST00000621061 203 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 SCARNA15.3-201ENST00000626315 122 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 SCARNA4.1-201ENST00000628597 123 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 AC009541.1-201ENST00000438279 2662 ntBASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RTN4RL1Q86UN2 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 RNU6-942P-201ENST00000363002 107 ntBASIC3.6□□□□□ -1.83
RTN4RL1Q86UN2 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms