Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RNU6-103P-201ENST00000363686 107 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 SNORD115-8-201ENST00000363856 82 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 RNU6-1048P-201ENST00000364054 107 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 SNORD115-38-201ENST00000365037 82 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 RNU1-140P-201ENST00000365040 165 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 Z98749.2-208ENST00000381646 500 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 MIR626-201ENST00000385032 94 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 RNU2-54P-201ENST00000410299 190 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 AC009963.1-201ENST00000417265 157 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 AL158823.1-201ENST00000418441 478 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 AC098614.2-201ENST00000426040 255 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 AL358075.3-201ENST00000426289 226 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 RPL23AP95-201ENST00000426806 265 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 AL162591.2-201ENST00000449634 317 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 KC877373.1-201ENST00000479066 408 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 RPL31P13-201ENST00000484151 370 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 RNU6-561P-201ENST00000516222 102 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 RNU1-6P-201ENST00000516290 144 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 AP001328.1-201ENST00000528550 176 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 AC020895.1-201ENST00000595362 272 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 AC108081.1-201ENST00000604358 221 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 AP001340.1-201ENST00000624405 217 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 AC011944.2-201ENST00000624440 683 ntBASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXR1Q6PIV2 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 RNU6-942P-201ENST00000363002 107 ntBASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 RNU6-837P-201ENST00000391056 108 ntBASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 RN7SKP179-201ENST00000516126 217 ntBASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 RNU6-436P-201ENST00000516171 114 ntBASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 SCARNA15.2-201ENST00000516409 127 ntBASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 SNORA31.9-201ENST00000516429 84 ntBASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 RNU6-1007P-201ENST00000516586 107 ntBASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 NACAP3-201ENST00000552100 481 ntBASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 CYCSP39-201ENST00000565821 309 ntBASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 AL160290.3-201ENST00000604869 165 ntBASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 U6.99-201ENST00000637524 83 ntBASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
FOXR1Q6PIV2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 RNU6-768P-201ENST00000384683 107 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 SNORA40.5-201ENST00000391061 128 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 U3.37-201ENST00000408528 213 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 RNU6-588P-201ENST00000410281 105 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 RN7SKP267-201ENST00000410381 285 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 CYP4F29P-201ENST00000420685 446 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 AC063976.4-201ENST00000421971 163 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 AC245047.8-201ENST00000456455 284 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 AC146507.2-201ENST00000460608 476 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 AC090049.2-201ENST00000550377 109 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 MIR5571-201ENST00000577998 113 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 MIR5699-201ENST00000578903 90 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 AL138963.2-201ENST00000605137 226 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 AP002826.1-201ENST00000608835 315 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 AC090132.2-201ENST00000615881 347 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 AP005019.3-201ENST00000620418 560 ntBASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
FOXR1Q6PIV2 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXR1Q6PIV2 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXR1Q6PIV2 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
FOXR1Q6PIV2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
FOXR1Q6PIV2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
FOXR1Q6PIV2 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
FOXR1Q6PIV2 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
FOXR1Q6PIV2 RNA5SP509-201ENST00000364577 119 ntBASIC4.51□□□□□ -1.69
FOXR1Q6PIV2 Y_RNA.293-201ENST00000364908 93 ntBASIC4.51□□□□□ -1.69
FOXR1Q6PIV2 RNU6-142P-201ENST00000384019 107 ntBASIC4.51□□□□□ -1.69
FOXR1Q6PIV2 RNU6-629P-201ENST00000384061 103 ntBASIC4.51□□□□□ -1.69
FOXR1Q6PIV2 RNU1-89P-201ENST00000384592 164 ntBASIC4.51□□□□□ -1.69
FOXR1Q6PIV2 MT-TT-201ENST00000387460 66 ntBASIC4.51□□□□□ -1.69
FOXR1Q6PIV2 RNA5SP397-201ENST00000391323 118 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms