Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RPL21P17-201ENST00000397467 475 ntBASIC4.87□□□□□ -1.63
USP46P62068 AL133475.1-201ENST00000404414 305 ntBASIC4.87□□□□□ -1.63
USP46P62068 AL606845.1-201ENST00000404881 255 ntBASIC4.87□□□□□ -1.63
USP46P62068 CKS1BP6-201ENST00000424932 240 ntBASIC4.87□□□□□ -1.63
USP46P62068 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC4.87□□□□□ -1.63
USP46P62068 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.87□□□□□ -1.63
USP46P62068 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.87□□□□□ -1.63
USP46P62068 RNU6-561P-201ENST00000516222 102 ntBASIC4.87□□□□□ -1.63
USP46P62068 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.87□□□□□ -1.63
USP46P62068 AC025281.1-201ENST00000567026 265 ntBASIC4.87□□□□□ -1.63
USP46P62068 MIR5006-201ENST00000583027 110 ntBASIC4.87□□□□□ -1.63
USP46P62068 U7.2-201ENST00000607576 63 ntBASIC4.87□□□□□ -1.63
USP46P62068 AC005562.2-201ENST00000618264 111 ntBASIC4.87□□□□□ -1.63
USP46P62068 AC073308.1-201ENST00000623696 305 ntBASIC4.87□□□□□ -1.63
USP46P62068 AC068205.3-201ENST00000636385 468 ntBASIC4.87□□□□□ -1.63
USP46P62068 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
USP46P62068 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
USP46P62068 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP46P62068 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
USP46P62068 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.87□□□□□ -1.63
USP46P62068 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP46P62068 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.86□□□□□ -1.63
USP46P62068 AP000542.2-201ENST00000623199 6179 ntBASIC4.86□□□□□ -1.63
USP46P62068 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
USP46P62068 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USP46P62068 RNU6-1298P-201ENST00000362456 101 ntBASIC4.86□□□□□ -1.63
USP46P62068 Y_RNA.43-201ENST00000362670 111 ntBASIC4.86□□□□□ -1.63
USP46P62068 Y_RNA.229-201ENST00000364347 113 ntBASIC4.86□□□□□ -1.63
USP46P62068 Y_RNA.563-201ENST00000384707 108 ntBASIC4.86□□□□□ -1.63
USP46P62068 RNU6-476P-201ENST00000384726 107 ntBASIC4.86□□□□□ -1.63
USP46P62068 MIR607-201ENST00000385241 96 ntBASIC4.86□□□□□ -1.63
USP46P62068 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.86□□□□□ -1.63
USP46P62068 PTMAP5-201ENST00000393073 333 ntBASIC4.86□□□□□ -1.63
USP46P62068 RNU6-588P-201ENST00000410281 105 ntBASIC4.86□□□□□ -1.63
USP46P62068 AC004866.1-201ENST00000411748 78 ntBASIC4.86□□□□□ -1.63
USP46P62068 AL732292.1-201ENST00000426692 226 ntBASIC4.86□□□□□ -1.63
USP46P62068 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.86□□□□□ -1.63
USP46P62068 AL161651.1-201ENST00000440882 223 ntBASIC4.86□□□□□ -1.63
USP46P62068 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.86□□□□□ -1.63
USP46P62068 SCARNA10-201ENST00000459255 330 ntBASIC4.86□□□□□ -1.63
USP46P62068 RNA5SP154-201ENST00000516193 111 ntBASIC4.86□□□□□ -1.63
USP46P62068 MIR3646-201ENST00000578301 84 ntBASIC4.86□□□□□ -1.63
USP46P62068 LINC00901.1-201ENST00000617252 152 ntBASIC4.86□□□□□ -1.63
USP46P62068 AL445567.2-201ENST00000618935 498 ntBASIC4.86□□□□□ -1.63
USP46P62068 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.86□□□□□ -1.63
USP46P62068 MIR6758-201ENST00000620653 63 ntBASIC4.86□□□□□ -1.63
USP46P62068 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USP46P62068 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
USP46P62068 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP46P62068 AC004944.1-201ENST00000517807 3059 ntBASIC4.86□□□□□ -1.63
USP46P62068 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USP46P62068 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP46P62068 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP46P62068 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
USP46P62068 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP46P62068 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
USP46P62068 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
USP46P62068 AL136964.1-201ENST00000622038 2990 ntBASIC4.86□□□□□ -1.63
USP46P62068 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
USP46P62068 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
USP46P62068 AC068254.2-201ENST00000623938 3577 ntBASIC4.85□□□□□ -1.63
USP46P62068 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP46P62068 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.85□□□□□ -1.63
USP46P62068 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP46P62068 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
USP46P62068 AL133243.3-201ENST00000617415 3004 ntBASIC4.85□□□□□ -1.63
USP46P62068 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP46P62068 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
USP46P62068 MIR367-201ENST00000362299 68 ntBASIC4.85□□□□□ -1.63
USP46P62068 RNU6-270P-201ENST00000364131 105 ntBASIC4.85□□□□□ -1.63
USP46P62068 Y_RNA.243-201ENST00000364481 109 ntBASIC4.85□□□□□ -1.63
USP46P62068 RNU6-728P-201ENST00000365375 104 ntBASIC4.85□□□□□ -1.63
USP46P62068 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
USP46P62068 RPL18P10-201ENST00000425606 538 ntBASIC4.85□□□□□ -1.63
USP46P62068 AC108751.2-201ENST00000469993 231 ntBASIC4.85□□□□□ -1.63
USP46P62068 AC107626.1-201ENST00000471084 183 ntBASIC4.85□□□□□ -1.63
USP46P62068 RNU6-344P-201ENST00000516635 111 ntBASIC4.85□□□□□ -1.63
USP46P62068 AC011602.1-201ENST00000546484 331 ntBASIC4.85□□□□□ -1.63
USP46P62068 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC4.85□□□□□ -1.63
USP46P62068 MIR4724-201ENST00000579485 89 ntBASIC4.85□□□□□ -1.63
USP46P62068 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.85□□□□□ -1.63
USP46P62068 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.85□□□□□ -1.63
USP46P62068 PCGEM1.1-201ENST00000613431 131 ntBASIC4.85□□□□□ -1.63
USP46P62068 TCL6_2.1-201ENST00000615162 119 ntBASIC4.85□□□□□ -1.63
USP46P62068 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.85□□□□□ -1.63
USP46P62068 AP001340.1-201ENST00000624405 217 ntBASIC4.85□□□□□ -1.63
USP46P62068 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.85□□□□□ -1.63
USP46P62068 AL136164.3-201ENST00000624429 3978 ntBASIC4.85□□□□□ -1.63
USP46P62068 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.85□□□□□ -1.63
USP46P62068 A2MP1-204ENST00000566278 4130 ntBASIC4.85□□□□□ -1.63
USP46P62068 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
USP46P62068 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.85□□□□□ -1.63
USP46P62068 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.85□□□□□ -1.63
USP46P62068 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
USP46P62068 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.85□□□□□ -1.63
USP46P62068 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
USP46P62068 SCN1A-220ENST00000641603 12506 ntBASIC4.84□□□□□ -1.63
USP46P62068 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
USP46P62068 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
USP46P62068 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms