Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.3□□□□□ -1.72
USP11P51784 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
USP11P51784 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.3□□□□□ -1.72
USP11P51784 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP11P51784 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.29□□□□□ -1.72
USP11P51784 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
USP11P51784 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
USP11P51784 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.29□□□□□ -1.72
USP11P51784 AL161912.2-201ENST00000565707 3007 ntBASIC4.29□□□□□ -1.72
USP11P51784 RNA5SP361-201ENST00000362686 118 ntBASIC4.29□□□□□ -1.72
USP11P51784 RNU6-78P-201ENST00000362897 107 ntBASIC4.29□□□□□ -1.72
USP11P51784 RNU6-335P-201ENST00000364563 113 ntBASIC4.29□□□□□ -1.72
USP11P51784 Y_RNA.446-201ENST00000384178 104 ntBASIC4.29□□□□□ -1.72
USP11P51784 CYCSP19-201ENST00000411715 316 ntBASIC4.29□□□□□ -1.72
USP11P51784 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.29□□□□□ -1.72
USP11P51784 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.29□□□□□ -1.72
USP11P51784 AL159169.1-201ENST00000421119 127 ntBASIC4.29□□□□□ -1.72
USP11P51784 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC4.29□□□□□ -1.72
USP11P51784 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.29□□□□□ -1.72
USP11P51784 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP11P51784 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.29□□□□□ -1.72
USP11P51784 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.29□□□□□ -1.72
USP11P51784 RN7SL542P-201ENST00000467147 294 ntBASIC4.29□□□□□ -1.72
USP11P51784 AC010285.1-201ENST00000470580 392 ntBASIC4.29□□□□□ -1.72
USP11P51784 RPS20P22-201ENST00000473700 357 ntBASIC4.29□□□□□ -1.72
USP11P51784 AL160314.1-201ENST00000490836 438 ntBASIC4.29□□□□□ -1.72
USP11P51784 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC4.29□□□□□ -1.72
USP11P51784 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.29□□□□□ -1.72
USP11P51784 MLLT10P2-201ENST00000506434 249 ntBASIC4.29□□□□□ -1.72
USP11P51784 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.29□□□□□ -1.72
USP11P51784 RNU6-1219P-201ENST00000516143 112 ntBASIC4.29□□□□□ -1.72
USP11P51784 SCARNA15.2-201ENST00000516409 127 ntBASIC4.29□□□□□ -1.72
USP11P51784 SNORA67.7-201ENST00000516664 135 ntBASIC4.29□□□□□ -1.72
USP11P51784 RNU1-45P-201ENST00000517191 141 ntBASIC4.29□□□□□ -1.72
USP11P51784 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.29□□□□□ -1.72
USP11P51784 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.29□□□□□ -1.72
USP11P51784 MIR3158-1-201ENST00000583596 81 ntBASIC4.29□□□□□ -1.72
USP11P51784 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC4.29□□□□□ -1.72
USP11P51784 MIR486-1-201ENST00000612171 68 ntBASIC4.29□□□□□ -1.72
USP11P51784 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP11P51784 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP11P51784 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.29□□□□□ -1.72
USP11P51784 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP11P51784 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP11P51784 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP11P51784 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP11P51784 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
USP11P51784 RNU6-879P-201ENST00000364328 108 ntBASIC4.28□□□□□ -1.72
USP11P51784 SNORA62.3-201ENST00000365110 153 ntBASIC4.28□□□□□ -1.72
USP11P51784 RNU6-1027P-201ENST00000383998 107 ntBASIC4.28□□□□□ -1.72
USP11P51784 MIR34A-201ENST00000385130 110 ntBASIC4.28□□□□□ -1.72
USP11P51784 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
USP11P51784 BTF3L4P2-201ENST00000392798 346 ntBASIC4.28□□□□□ -1.72
USP11P51784 AL139247.1-201ENST00000422768 325 ntBASIC4.28□□□□□ -1.72
USP11P51784 AC007560.1-201ENST00000426912 237 ntBASIC4.28□□□□□ -1.72
USP11P51784 RPS15AP7-201ENST00000439294 405 ntBASIC4.28□□□□□ -1.72
USP11P51784 AP001324.2-201ENST00000461163 319 ntBASIC4.28□□□□□ -1.72
USP11P51784 AP000870.1-201ENST00000472927 406 ntBASIC4.28□□□□□ -1.72
USP11P51784 AP001025.1-201ENST00000486139 332 ntBASIC4.28□□□□□ -1.72
USP11P51784 AC091959.1-201ENST00000495857 238 ntBASIC4.28□□□□□ -1.72
USP11P51784 AC074133.1-201ENST00000515696 183 ntBASIC4.28□□□□□ -1.72
USP11P51784 Y_RNA.679-201ENST00000516416 91 ntBASIC4.28□□□□□ -1.72
USP11P51784 RNU6-1256P-201ENST00000516539 103 ntBASIC4.28□□□□□ -1.72
USP11P51784 RNU6-572P-201ENST00000516724 80 ntBASIC4.28□□□□□ -1.72
USP11P51784 AK6P2-201ENST00000549020 471 ntBASIC4.28□□□□□ -1.72
USP11P51784 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
USP11P51784 MIR4308-201ENST00000580634 81 ntBASIC4.28□□□□□ -1.72
USP11P51784 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.28□□□□□ -1.72
USP11P51784 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.28□□□□□ -1.72
USP11P51784 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.28□□□□□ -1.72
USP11P51784 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP11P51784 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.28□□□□□ -1.72
USP11P51784 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.28□□□□□ -1.73
USP11P51784 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP11P51784 AL365440.1-201ENST00000436135 2167 ntBASIC4.27□□□□□ -1.73
USP11P51784 AC004925.1-201ENST00000624256 2706 ntBASIC4.27□□□□□ -1.73
USP11P51784 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP11P51784 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP11P51784 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP11P51784 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.27□□□□□ -1.73
USP11P51784 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP11P51784 DEFB108F-201ENST00000344638 222 ntBASIC4.27□□□□□ -1.73
USP11P51784 RNU6-1290P-201ENST00000362957 109 ntBASIC4.27□□□□□ -1.73
USP11P51784 Y_RNA.81-201ENST00000362997 102 ntBASIC4.27□□□□□ -1.73
USP11P51784 Y_RNA.304-201ENST00000365011 112 ntBASIC4.27□□□□□ -1.73
USP11P51784 RNU6-843P-201ENST00000384454 104 ntBASIC4.27□□□□□ -1.73
USP11P51784 U8.11-201ENST00000384699 133 ntBASIC4.27□□□□□ -1.73
USP11P51784 U8.12-201ENST00000384701 133 ntBASIC4.27□□□□□ -1.73
USP11P51784 RNA5SP424-201ENST00000390988 115 ntBASIC4.27□□□□□ -1.73
USP11P51784 SNORD12B-201ENST00000410433 91 ntBASIC4.27□□□□□ -1.73
USP11P51784 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC4.27□□□□□ -1.73
USP11P51784 U8.18-201ENST00000459285 133 ntBASIC4.27□□□□□ -1.73
USP11P51784 AC073901.1-201ENST00000462471 408 ntBASIC4.27□□□□□ -1.73
USP11P51784 BTF3L4P4-201ENST00000506381 449 ntBASIC4.27□□□□□ -1.73
USP11P51784 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.27□□□□□ -1.73
USP11P51784 RNA5SP290-201ENST00000517133 127 ntBASIC4.27□□□□□ -1.73
USP11P51784 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP11P51784 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.27□□□□□ -1.73
USP11P51784 AC027288.2-201ENST00000553028 243 ntBASIC4.27□□□□□ -1.73
USP11P51784 RPL21P9-201ENST00000556149 474 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms