Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
GPC1P35052 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
GPC1P35052 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
GPC1P35052 ZFRP1-201ENST00000457579 2970 ntBASIC4.41□□□□□ -1.7
GPC1P35052 ADAM3A-203ENST00000461344 2157 ntBASIC4.41□□□□□ -1.7
GPC1P35052 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
GPC1P35052 AC006971.1-201ENST00000407916 4486 ntBASIC4.41□□□□□ -1.7
GPC1P35052 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GPC1P35052 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GPC1P35052 AC073073.2-201ENST00000609827 2578 ntBASIC4.41□□□□□ -1.7
GPC1P35052 RNU6-915P-201ENST00000364943 103 ntBASIC4.41□□□□□ -1.7
GPC1P35052 U1.1-201ENST00000384101 164 ntBASIC4.41□□□□□ -1.7
GPC1P35052 AL355497.1-201ENST00000406262 551 ntBASIC4.41□□□□□ -1.7
GPC1P35052 RN7SKP267-201ENST00000410381 285 ntBASIC4.41□□□□□ -1.7
GPC1P35052 RNA5SP146-201ENST00000410743 123 ntBASIC4.41□□□□□ -1.7
GPC1P35052 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.41□□□□□ -1.7
GPC1P35052 RPL12P3-201ENST00000440080 396 ntBASIC4.41□□□□□ -1.7
GPC1P35052 RPL30P5-201ENST00000494923 336 ntBASIC4.41□□□□□ -1.7
GPC1P35052 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.41□□□□□ -1.7
GPC1P35052 RNU5E-3P-201ENST00000515913 68 ntBASIC4.41□□□□□ -1.7
GPC1P35052 RNU6-561P-201ENST00000516222 102 ntBASIC4.41□□□□□ -1.7
GPC1P35052 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.41□□□□□ -1.7
GPC1P35052 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.41□□□□□ -1.7
GPC1P35052 MIR3646-201ENST00000578301 84 ntBASIC4.41□□□□□ -1.7
GPC1P35052 MIR4646-201ENST00000580775 63 ntBASIC4.41□□□□□ -1.7
GPC1P35052 AL391903.3-201ENST00000612158 163 ntBASIC4.41□□□□□ -1.7
GPC1P35052 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.41□□□□□ -1.7
GPC1P35052 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.41□□□□□ -1.7
GPC1P35052 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.41□□□□□ -1.7
GPC1P35052 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
GPC1P35052 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GPC1P35052 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
GPC1P35052 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
GPC1P35052 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.4□□□□□ -1.7
GPC1P35052 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GPC1P35052 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
GPC1P35052 RNA5SP191-201ENST00000362585 102 ntBASIC4.4□□□□□ -1.71
GPC1P35052 SNORD115-30-201ENST00000364117 82 ntBASIC4.4□□□□□ -1.71
GPC1P35052 SNORD87-201ENST00000364849 89 ntBASIC4.4□□□□□ -1.71
GPC1P35052 Y_RNA.341-201ENST00000365341 102 ntBASIC4.4□□□□□ -1.71
GPC1P35052 Z98745.1-201ENST00000402553 494 ntBASIC4.4□□□□□ -1.71
GPC1P35052 AL606845.1-201ENST00000404881 255 ntBASIC4.4□□□□□ -1.71
GPC1P35052 CYCSP49-201ENST00000420810 319 ntBASIC4.4□□□□□ -1.71
GPC1P35052 AC245028.1-201ENST00000423259 256 ntBASIC4.4□□□□□ -1.71
GPC1P35052 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.4□□□□□ -1.71
GPC1P35052 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GPC1P35052 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GPC1P35052 SNORD108-201ENST00000459332 71 ntBASIC4.4□□□□□ -1.71
GPC1P35052 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.4□□□□□ -1.71
GPC1P35052 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.4□□□□□ -1.71
GPC1P35052 RNU6-1282P-201ENST00000516735 96 ntBASIC4.4□□□□□ -1.71
GPC1P35052 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.4□□□□□ -1.71
GPC1P35052 MIR3667-201ENST00000581025 74 ntBASIC4.4□□□□□ -1.71
GPC1P35052 AC090897.2-201ENST00000581715 130 ntBASIC4.4□□□□□ -1.71
GPC1P35052 AL391358.1-201ENST00000605342 190 ntBASIC4.4□□□□□ -1.71
GPC1P35052 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
GPC1P35052 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
GPC1P35052 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GPC1P35052 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
GPC1P35052 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
GPC1P35052 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.4□□□□□ -1.71
GPC1P35052 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
GPC1P35052 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.4□□□□□ -1.71
GPC1P35052 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GPC1P35052 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
GPC1P35052 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
GPC1P35052 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
GPC1P35052 RNU6-235P-201ENST00000362644 107 ntBASIC4.39□□□□□ -1.71
GPC1P35052 RNY1P11-201ENST00000363759 113 ntBASIC4.39□□□□□ -1.71
GPC1P35052 RNA5SP267-201ENST00000364893 126 ntBASIC4.39□□□□□ -1.71
GPC1P35052 MIR195-201ENST00000385194 87 ntBASIC4.39□□□□□ -1.71
GPC1P35052 RPL21P17-201ENST00000397467 475 ntBASIC4.39□□□□□ -1.71
GPC1P35052 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.39□□□□□ -1.71
GPC1P35052 AL590762.4-201ENST00000425885 253 ntBASIC4.39□□□□□ -1.71
GPC1P35052 RPS27P1-201ENST00000450552 247 ntBASIC4.39□□□□□ -1.71
GPC1P35052 RPL36AP41-201ENST00000493820 306 ntBASIC4.39□□□□□ -1.71
GPC1P35052 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.39□□□□□ -1.71
GPC1P35052 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.39□□□□□ -1.71
GPC1P35052 AL445567.2-201ENST00000618935 498 ntBASIC4.39□□□□□ -1.71
GPC1P35052 AC005086.4-201ENST00000623065 213 ntBASIC4.39□□□□□ -1.71
GPC1P35052 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GPC1P35052 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GPC1P35052 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
GPC1P35052 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GPC1P35052 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
GPC1P35052 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
GPC1P35052 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
GPC1P35052 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
GPC1P35052 AC106871.1-201ENST00000568324 3102 ntBASIC4.38□□□□□ -1.71
GPC1P35052 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC4.38□□□□□ -1.71
GPC1P35052 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.38□□□□□ -1.71
GPC1P35052 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
GPC1P35052 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.38□□□□□ -1.71
GPC1P35052 RNA5SP28-201ENST00000363841 119 ntBASIC4.38□□□□□ -1.71
GPC1P35052 Y_RNA.294-201ENST00000364916 102 ntBASIC4.38□□□□□ -1.71
GPC1P35052 SNORA71.2-201ENST00000364941 134 ntBASIC4.38□□□□□ -1.71
GPC1P35052 RNU6-728P-201ENST00000365375 104 ntBASIC4.38□□□□□ -1.71
GPC1P35052 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
GPC1P35052 MIR526A2-201ENST00000390198 65 ntBASIC4.38□□□□□ -1.71
GPC1P35052 RNA5SP390-201ENST00000410191 113 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms