Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 RNU1-89P-201ENST00000384592 164 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 MIR1302-6-201ENST00000408466 90 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 MIR1183-201ENST00000408856 89 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 PPP1R11P2-201ENST00000423543 382 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 AL513328.1-201ENST00000446460 224 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.39□□□□□ -1.87
POLR2AP24928 AL360271.2-201ENST00000447710 161 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 RNU6-1037P-201ENST00000459571 107 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 AC108860.1-201ENST00000484521 383 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 AC068781.1-201ENST00000488231 618 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 ACA59.1-201ENST00000515966 143 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 RN7SKP272-201ENST00000516988 232 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 AC109479.2-201ENST00000517842 174 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.39□□□□□ -1.87
POLR2AP24928 IGHV3-76-201ENST00000522465 295 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 AP003385.6-201ENST00000531603 374 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.39□□□□□ -1.87
POLR2AP24928 MIR3921-201ENST00000577308 85 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 AL355810.1-201ENST00000614629 552 ntBASIC3.39□□□□□ -1.87
POLR2AP24928 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
POLR2AP24928 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
POLR2AP24928 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
POLR2AP24928 AL033519.2-201ENST00000403958 392 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.38□□□□□ -1.87
POLR2AP24928 AL121871.1-201ENST00000443413 436 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 AC090525.1-201ENST00000479116 478 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 RPL31P13-201ENST00000484151 370 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 RNA5SP24-201ENST00000516478 95 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.38□□□□□ -1.87
POLR2AP24928 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.38□□□□□ -1.87
POLR2AP24928 AC096772.1-201ENST00000609146 564 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 Z99571.1-201ENST00000636677 394 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.38□□□□□ -1.87
POLR2AP24928 AL139811.1-201ENST00000424779 2299 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.38□□□□□ -1.87
POLR2AP24928 RNU6-715P-201ENST00000365204 103 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 RNU6-95P-201ENST00000384697 107 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 RNU6-541P-201ENST00000384709 110 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 AL138827.1-201ENST00000402666 306 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
POLR2AP24928 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.38□□□□□ -1.87
POLR2AP24928 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.38□□□□□ -1.87
POLR2AP24928 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.38□□□□□ -1.87
POLR2AP24928 AC144568.1-201ENST00000520139 137 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 AP003733.2-201ENST00000529409 171 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.38□□□□□ -1.87
POLR2AP24928 AC009779.6-201ENST00000603972 165 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 RMST_4.1-201ENST00000616886 107 ntBASIC3.38□□□□□ -1.87
POLR2AP24928 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
POLR2AP24928 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
POLR2AP24928 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
POLR2AP24928 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
POLR2AP24928 RPL9P7-201ENST00000330965 580 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-37P-201ENST00000362692 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-11P-201ENST00000364234 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-25P-201ENST00000383873 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-1-201ENST00000383898 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-48P-201ENST00000384161 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-36P-201ENST00000384172 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-4P-201ENST00000384205 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-5P-201ENST00000384238 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-3P-201ENST00000384314 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-16P-201ENST00000384385 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-15P-201ENST00000384534 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-2-201ENST00000384627 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-29P-201ENST00000384637 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-9-201ENST00000384776 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-33P-201ENST00000384793 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 MIR215-201ENST00000384858 110 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 AC092047.1-201ENST00000424997 240 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 AL513043.1-201ENST00000439124 535 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RPL9P9-202ENST00000466501 579 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 FO393415.2-201ENST00000480085 343 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 TBCAP3-201ENST00000512475 312 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-1023P-201ENST00000516137 106 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNA5SP471-201ENST00000516971 106 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 MIR2355-201ENST00000517199 87 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 AC090281.1-201ENST00000523019 276 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.37□□□□□ -1.87
POLR2AP24928 TRAV32-201ENST00000553993 340 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.37□□□□□ -1.87
POLR2AP24928 AL355297.3-201ENST00000604082 446 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 RNU6-6P-201ENST00000606623 107 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 MIR376A1-201ENST00000616574 68 ntBASIC3.37□□□□□ -1.87
POLR2AP24928 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
POLR2AP24928 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.37□□□□□ -1.87
POLR2AP24928 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
POLR2AP24928 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.37□□□□□ -1.87
POLR2AP24928 Y_RNA.222-201ENST00000364264 102 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 SAR1AP2-201ENST00000392696 594 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 RPS4XP7-201ENST00000406274 780 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.36□□□□□ -1.87
POLR2AP24928 EIF4EP2-201ENST00000422816 654 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 HMGB1P9-201ENST00000429856 646 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 AL591212.2-201ENST00000433923 257 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.36□□□□□ -1.87
POLR2AP24928 VWA8P1-201ENST00000510889 176 ntBASIC3.36□□□□□ -1.87
POLR2AP24928 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.36□□□□□ -1.87
POLR2AP24928 SNORD53-201ENST00000579969 78 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms