Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 MIR223-201ENST00000385204 110 ntBASIC6.09□□□□□ -1.43
SPDYE4A6NLX3 snoU13.28-201ENST00000459235 104 ntBASIC6.09□□□□□ -1.43
SPDYE4A6NLX3 ATP5EP1-201ENST00000510257 156 ntBASIC6.09□□□□□ -1.43
SPDYE4A6NLX3 MRPS21P7-201ENST00000566937 238 ntBASIC6.09□□□□□ -1.43
SPDYE4A6NLX3 RPSAP73-201ENST00000614820 330 ntBASIC6.09□□□□□ -1.43
SPDYE4A6NLX3 AC090607.5-201ENST00000615692 224 ntBASIC6.09□□□□□ -1.43
SPDYE4A6NLX3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.09□□□□□ -1.43
SPDYE4A6NLX3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SPDYE4A6NLX3 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
SPDYE4A6NLX3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SPDYE4A6NLX3 AL031595.2-201ENST00000624215 19071 ntBASIC6.09□□□□□ -1.44
SPDYE4A6NLX3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.09□□□□□ -1.44
SPDYE4A6NLX3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.08□□□□□ -1.44
SPDYE4A6NLX3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPDYE4A6NLX3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
SPDYE4A6NLX3 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPDYE4A6NLX3 AC022655.2-201ENST00000577280 318 ntBASIC6.08□□□□□ -1.44
SPDYE4A6NLX3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC6.08□□□□□ -1.44
SPDYE4A6NLX3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC6.08□□□□□ -1.44
SPDYE4A6NLX3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
SPDYE4A6NLX3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPDYE4A6NLX3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SPDYE4A6NLX3 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SPDYE4A6NLX3 AC004817.4-201ENST00000602396 3625 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 SNURFL-201ENST00000309296 343 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 RNA5SP507-201ENST00000363603 121 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 SNORD32B-201ENST00000364460 84 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 Y_RNA.486-201ENST00000384398 107 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 MIR562-201ENST00000384894 95 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 AC245102.2-201ENST00000448956 180 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 RNA5SP310-201ENST00000459084 116 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 RN7SL583P-201ENST00000475692 287 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 AC023141.12-201ENST00000512399 199 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 AL137067.1-201ENST00000615933 120 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 AC118658.2-201ENST00000618697 459 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 AC015726.2-201ENST00000620112 122 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 AL035470.1-201ENST00000622571 220 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 AC002064.3-201ENST00000623448 346 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 AC006435.5-201ENST00000624486 112 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 AC010889.1-201ENST00000566193 2666 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 MUC2-202ENST00000613187 4845 ntBASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SPDYE4A6NLX3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 Y_RNA.66-201ENST00000362862 102 ntBASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 Y_RNA.796-201ENST00000364268 102 ntBASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 Y_RNA.799-201ENST00000364992 102 ntBASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 RNU6-117P-201ENST00000365415 107 ntBASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 RNU2-49P-201ENST00000410666 184 ntBASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 NDUFB4P8-201ENST00000435351 367 ntBASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 RN7SL172P-201ENST00000460535 303 ntBASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 AC008155.2-201ENST00000464337 397 ntBASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 RN7SL585P-201ENST00000470538 280 ntBASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 RNU6-504P-201ENST00000516568 104 ntBASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 MIR3129-201ENST00000581095 76 ntBASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 MIR6798-201ENST00000612887 67 ntBASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 AL110115.1-201ENST00000614396 364 ntBASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC6.06□□□□□ -1.44
SPDYE4A6NLX3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC6.05□□□□□ -1.44
SPDYE4A6NLX3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
SPDYE4A6NLX3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SPDYE4A6NLX3 AC000403.1-201ENST00000613696 3585 ntBASIC6.05□□□□□ -1.44
SPDYE4A6NLX3 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
SPDYE4A6NLX3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC6.05□□□□□ -1.44
SPDYE4A6NLX3 AC006504.1-201ENST00000562493 3666 ntBASIC6.05□□□□□ -1.44
SPDYE4A6NLX3 RNU6-1209P-201ENST00000363655 107 ntBASIC6.05□□□□□ -1.44
SPDYE4A6NLX3 RNA5SP354-201ENST00000391247 136 ntBASIC6.05□□□□□ -1.44
SPDYE4A6NLX3 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.05□□□□□ -1.44
SPDYE4A6NLX3 RNU6-57P-201ENST00000411348 103 ntBASIC6.05□□□□□ -1.44
SPDYE4A6NLX3 AC063976.3-201ENST00000426849 329 ntBASIC6.05□□□□□ -1.44
SPDYE4A6NLX3 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 161.9 ms