Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.46□□□□□ -1.7
PCDHGA11Q9Y5H2 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 Y_RNA.182-201ENST00000363880 111 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 SNORA74A-201ENST00000364089 198 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 Y_RNA.329-201ENST00000365209 107 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU6-1264P-201ENST00000383891 107 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU6-22P-201ENST00000384355 107 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU6-959P-201ENST00000384671 107 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU6-19P-201ENST00000384718 107 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 MIR549A-201ENST00000385268 96 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 CBX3P9-201ENST00000402326 552 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 RPL23AP48-201ENST00000406913 488 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 RPL7AP25-201ENST00000423357 805 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 RPL23AP82-202ENST00000427528 469 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 AL049745.1-201ENST00000433953 286 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 AL353748.1-201ENST00000440753 474 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 RPL36AP41-201ENST00000493820 306 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU5F-2P-201ENST00000516066 82 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 RNA5SP497-201ENST00000516081 97 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU6-479P-201ENST00000516348 105 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 AC091042.1-201ENST00000579213 173 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 AC091178.1-203ENST00000584586 279 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 AC024220.1-201ENST00000603675 484 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU6-91P-201ENST00000607774 107 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 MIR6719-201ENST00000622428 87 ntBASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PCDHGA11Q9Y5H2 AC006971.1-201ENST00000407916 4486 ntBASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 ZNF137P-201ENST00000456718 1920 ntBASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 SNORA71.2-201ENST00000364941 134 ntBASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 PTGES3P4-201ENST00000426243 356 ntBASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 AL162725.1-201ENST00000435405 301 ntBASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 AC103975.1-201ENST00000482506 483 ntBASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU6-313P-201ENST00000516317 112 ntBASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 SNORD19.2-201ENST00000516978 73 ntBASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 IGKV1-32-201ENST00000519290 311 ntBASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 AC105129.1-201ENST00000560250 297 ntBASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 MIR3684-201ENST00000579779 74 ntBASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 AC004825.2-201ENST00000616634 455 ntBASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 U3.53-201ENST00000628922 216 ntBASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
PCDHGA11Q9Y5H2 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU4-84P-201ENST00000364200 139 ntBASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU6-748P-201ENST00000384648 107 ntBASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 Y_RNA.568-201ENST00000384742 113 ntBASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 U3.22-201ENST00000391120 215 ntBASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 SDHCP2-201ENST00000398565 501 ntBASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 U3.40-201ENST00000408706 208 ntBASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 RN7SKP177-201ENST00000410567 355 ntBASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 AC025946.2-201ENST00000603398 234 ntBASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 AL034555.1-201ENST00000604816 211 ntBASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 MIR7154-201ENST00000620673 73 ntBASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 AC027290.2-201ENST00000623210 18662 ntBASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 AC011266.1-201ENST00000624119 3569 ntBASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
PCDHGA11Q9Y5H2 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 AC125257.1-201ENST00000560400 2930 ntBASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 Y_RNA.215-201ENST00000364204 112 ntBASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 Y_RNA.412-201ENST00000384001 104 ntBASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 RNU6-1154P-201ENST00000391001 104 ntBASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 MIR298-201ENST00000401212 88 ntBASIC4.42□□□□□ -1.7
PCDHGA11Q9Y5H2 NDUFS5P3-201ENST00000450668 321 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms