Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CTC1Q2NKJ3 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 RNU6-942P-201ENST00000363002 107 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 RNU6-813P-201ENST00000384691 107 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 RNY1P7-201ENST00000384743 110 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 MIR29B2-201ENST00000385055 81 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 RN7SL98P-201ENST00000462271 300 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 RPL30P12-201ENST00000474666 353 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 RPL23AP70-201ENST00000483361 460 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 MLLT10P2-201ENST00000506434 249 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 RNU6-1146P-201ENST00000516282 102 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 MIR3158-1-201ENST00000583596 81 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 AL591034.3-201ENST00000605511 685 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 AC006133.1-201ENST00000617106 264 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 AC006065.5-201ENST00000623427 349 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 AC012640.5-201ENST00000623897 319 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 AC004925.1-201ENST00000624256 2706 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 Z73965.1-201ENST00000623412 2297 ntBASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CTC1Q2NKJ3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 U3.9-201ENST00000363823 204 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 Y_RNA.219-201ENST00000364232 113 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 Y_RNA.328-201ENST00000365208 113 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 RNU6-1228P-201ENST00000391014 107 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 SNORA40C-201ENST00000391285 128 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 AL590762.2-201ENST00000395798 571 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 SDHCP2-201ENST00000398565 501 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 PPIAP31-201ENST00000405422 495 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 U6atac.2-201ENST00000408644 118 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 U3.40-201ENST00000408706 208 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 RPS3AP1-201ENST00000413190 320 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 AC006028.1-201ENST00000438379 402 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 RPS26P2-201ENST00000440331 348 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 AC092798.1-201ENST00000458542 409 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 RNU6-1198P-201ENST00000516904 67 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 AC006199.1-201ENST00000548728 219 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 RN7SL176P-201ENST00000580352 264 ntBASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CTC1Q2NKJ3 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 RNU6-1107P-201ENST00000364817 104 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 SNORA72.4-201ENST00000384174 132 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 AL512633.1-201ENST00000399931 655 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 Z98745.1-201ENST00000402553 494 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 RN7SKP53-201ENST00000411337 315 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 AC074117.2-201ENST00000417130 397 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 YPEL5P1-201ENST00000419731 367 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 AL358075.3-201ENST00000426289 226 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 HMGB3P8-201ENST00000449709 577 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 SCARNA10-201ENST00000459255 330 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 AC139453.3-201ENST00000493276 369 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 SNORA40.13-201ENST00000516379 120 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 AC006380.1-201ENST00000603598 186 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 AL442128.1-201ENST00000615151 90 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 SNORA43.4-201ENST00000629559 138 ntBASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CTC1Q2NKJ3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms