Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC098679.4-201ENST00000624241 654 ntBASIC2.75□□□□□ -1.97
RB1P06400 MIR3529-201ENST00000637713 78 ntBASIC2.75□□□□□ -1.97
RB1P06400 AC135776.4-201ENST00000624300 1904 ntBASIC2.75□□□□□ -1.97
RB1P06400 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RB1P06400 AC080128.1-201ENST00000474389 1917 ntBASIC2.74□□□□□ -1.97
RB1P06400 RNU6-78P-201ENST00000362897 107 ntBASIC2.74□□□□□ -1.97
RB1P06400 RNU4-20P-201ENST00000365601 151 ntBASIC2.74□□□□□ -1.97
RB1P06400 RNU6-38P-201ENST00000384085 107 ntBASIC2.74□□□□□ -1.97
RB1P06400 SNORD88.1-201ENST00000408684 91 ntBASIC2.74□□□□□ -1.97
RB1P06400 MTCO1P21-201ENST00000416634 589 ntBASIC2.74□□□□□ -1.97
RB1P06400 BX276092.3-201ENST00000424182 230 ntBASIC2.74□□□□□ -1.97
RB1P06400 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RB1P06400 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.74□□□□□ -1.97
RB1P06400 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.74□□□□□ -1.97
RB1P06400 AL139415.2-201ENST00000431968 163 ntBASIC2.74□□□□□ -1.97
RB1P06400 HMGB1P31-201ENST00000437242 427 ntBASIC2.74□□□□□ -1.97
RB1P06400 AL121601.2-201ENST00000438019 707 ntBASIC2.74□□□□□ -1.97
RB1P06400 AC011816.1-201ENST00000441346 546 ntBASIC2.74□□□□□ -1.97
RB1P06400 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.74□□□□□ -1.97
RB1P06400 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.74□□□□□ -1.97
RB1P06400 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
RB1P06400 snoU13.23-201ENST00000458863 104 ntBASIC2.74□□□□□ -1.97
RB1P06400 RNU6-333P-201ENST00000459117 107 ntBASIC2.74□□□□□ -1.97
RB1P06400 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.74□□□□□ -1.97
RB1P06400 RNU5B-3P-201ENST00000516601 115 ntBASIC2.74□□□□□ -1.97
RB1P06400 AC090115.3-201ENST00000553218 849 ntBASIC2.74□□□□□ -1.97
RB1P06400 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.74□□□□□ -1.97
RB1P06400 MIR4635-201ENST00000583759 79 ntBASIC2.74□□□□□ -1.97
RB1P06400 MIR3616-201ENST00000584070 92 ntBASIC2.74□□□□□ -1.97
RB1P06400 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC2.74□□□□□ -1.97
RB1P06400 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.74□□□□□ -1.97
RB1P06400 AC068790.6-201ENST00000602558 258 ntBASIC2.74□□□□□ -1.97
RB1P06400 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.74□□□□□ -1.97
RB1P06400 MIR7157-201ENST00000635801 60 ntBASIC2.74□□□□□ -1.97
RB1P06400 AC068137.3-201ENST00000639191 341 ntBASIC2.74□□□□□ -1.97
RB1P06400 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RB1P06400 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RB1P06400 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
RB1P06400 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
RB1P06400 AC138393.1-203ENST00000327086 343 ntBASIC2.73□□□□□ -1.97
RB1P06400 RPL9P7-201ENST00000330965 580 ntBASIC2.73□□□□□ -1.97
RB1P06400 Y_RNA.9-201ENST00000362354 101 ntBASIC2.73□□□□□ -1.97
RB1P06400 RNU5E-7P-201ENST00000365290 117 ntBASIC2.73□□□□□ -1.97
RB1P06400 RNU6-843P-201ENST00000384454 104 ntBASIC2.73□□□□□ -1.97
RB1P06400 SNORD116-20-201ENST00000384529 92 ntBASIC2.73□□□□□ -1.97
RB1P06400 Y_RNA.554-201ENST00000384672 102 ntBASIC2.73□□□□□ -1.97
RB1P06400 MIR518C-201ENST00000384822 101 ntBASIC2.73□□□□□ -1.97
RB1P06400 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.73□□□□□ -1.97
RB1P06400 RNU6-908P-201ENST00000410160 94 ntBASIC2.73□□□□□ -1.97
RB1P06400 RN7SKP223-201ENST00000410582 62 ntBASIC2.73□□□□□ -1.97
RB1P06400 RNU6-1068P-201ENST00000410958 103 ntBASIC2.73□□□□□ -1.97
RB1P06400 OR9R1P-201ENST00000412200 877 ntBASIC2.73□□□□□ -1.97
RB1P06400 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.73□□□□□ -1.97
RB1P06400 USP9YP27-201ENST00000418455 438 ntBASIC2.73□□□□□ -1.97
RB1P06400 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.73□□□□□ -1.97
RB1P06400 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.73□□□□□ -1.97
RB1P06400 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.73□□□□□ -1.97
RB1P06400 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.73□□□□□ -1.97
RB1P06400 MTCO3P38-201ENST00000468910 766 ntBASIC2.73□□□□□ -1.97
RB1P06400 RN7SL636P-201ENST00000497504 294 ntBASIC2.73□□□□□ -1.97
RB1P06400 RNA5SP112-201ENST00000515937 99 ntBASIC2.73□□□□□ -1.97
RB1P06400 SNORA31.18-201ENST00000517043 134 ntBASIC2.73□□□□□ -1.97
RB1P06400 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.73□□□□□ -1.97
RB1P06400 AC109635.3-201ENST00000529536 185 ntBASIC2.73□□□□□ -1.97
RB1P06400 OR11H5P-201ENST00000554039 926 ntBASIC2.73□□□□□ -1.97
RB1P06400 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.73□□□□□ -1.97
RB1P06400 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.73□□□□□ -1.97
RB1P06400 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.73□□□□□ -1.97
RB1P06400 FER-210ENST00000628534 558 ntTSL 5 BASIC2.73□□□□□ -1.97
RB1P06400 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.73□□□□□ -1.97
RB1P06400 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.73□□□□□ -1.97
RB1P06400 HAUS6P2-201ENST00000433254 2404 ntBASIC2.73□□□□□ -1.97
RB1P06400 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.73□□□□□ -1.97
RB1P06400 RBBP8P1-201ENST00000449447 1844 ntBASIC2.72□□□□□ -1.97
RB1P06400 Y_RNA.6-201ENST00000362350 114 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-37P-201ENST00000362692 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-486P-201ENST00000363116 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-82P-201ENST00000363970 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-1090P-201ENST00000364065 94 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-11P-201ENST00000364234 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU4-66P-201ENST00000365199 138 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-487P-201ENST00000365430 104 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-25P-201ENST00000383873 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-1-201ENST00000383898 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 Y_RNA.402-201ENST00000383972 102 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-48P-201ENST00000384161 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-36P-201ENST00000384172 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-4P-201ENST00000384205 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-5P-201ENST00000384238 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-3P-201ENST00000384314 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-16P-201ENST00000384385 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-15P-201ENST00000384534 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-2-201ENST00000384627 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-29P-201ENST00000384637 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-9-201ENST00000384776 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNU6-33P-201ENST00000384793 107 ntBASIC2.72□□□□□ -1.97
RB1P06400 MIR514A2-201ENST00000385131 88 ntBASIC2.72□□□□□ -1.97
RB1P06400 MIR514A3-201ENST00000385132 88 ntBASIC2.72□□□□□ -1.97
RB1P06400 RNA5SP219-201ENST00000390940 113 ntBASIC2.72□□□□□ -1.97
RB1P06400 AL133475.1-201ENST00000404414 305 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms