Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 COX6CP5-201ENST00000527162 228 ntBASIC2.65□□□□□ -1.99
NKX2-2O95096 AC118273.2-201ENST00000532092 465 ntBASIC2.65□□□□□ -1.99
NKX2-2O95096 AC087241.2-201ENST00000535801 324 ntBASIC2.65□□□□□ -1.99
NKX2-2O95096 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.65□□□□□ -1.99
NKX2-2O95096 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.65□□□□□ -1.99
NKX2-2O95096 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.65□□□□□ -1.99
NKX2-2O95096 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.65□□□□□ -1.99
NKX2-2O95096 MIR3942-201ENST00000585264 109 ntBASIC2.65□□□□□ -1.99
NKX2-2O95096 AC011712.1-201ENST00000588959 234 ntBASIC2.65□□□□□ -1.99
NKX2-2O95096 AC023043.2-201ENST00000589678 1026 ntBASIC2.65□□□□□ -1.99
NKX2-2O95096 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.65□□□□□ -1.99
NKX2-2O95096 AC097372.5-201ENST00000623665 376 ntBASIC2.65□□□□□ -1.99
NKX2-2O95096 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.65□□□□□ -1.99
NKX2-2O95096 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
NKX2-2O95096 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.64□□□□□ -1.99
NKX2-2O95096 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
NKX2-2O95096 AC080128.1-201ENST00000474389 1917 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 RPL9P7-201ENST00000330965 580 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 SNORD114-19-201ENST00000363072 75 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 Y_RNA.160-201ENST00000363677 92 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NKX2-2O95096 SNORA32.2-201ENST00000384049 122 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NKX2-2O95096 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 BMS1P22-201ENST00000414726 313 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 RPL21P111-201ENST00000418453 477 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 AL139132.1-201ENST00000431587 344 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 IFNA20P-201ENST00000436840 528 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NKX2-2O95096 AC243964.1-201ENST00000441814 261 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 AC112771.1-201ENST00000463581 102 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 RPS29P26-201ENST00000477483 171 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 RNU4-49P-201ENST00000516080 140 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 SCARNA13-201ENST00000516672 275 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 SNORA20.3-201ENST00000516880 132 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.64□□□□□ -1.99
NKX2-2O95096 AC104576.1-201ENST00000524225 88 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 AC026371.1-201ENST00000551867 419 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.64□□□□□ -1.99
NKX2-2O95096 AC103810.1-201ENST00000579873 453 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 MIR3616-201ENST00000584070 92 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.64□□□□□ -1.99
NKX2-2O95096 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 AC024581.2-201ENST00000619986 252 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.64□□□□□ -1.99
NKX2-2O95096 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
NKX2-2O95096 Z75746.1-201ENST00000440243 2080 ntBASIC2.64□□□□□ -1.99
NKX2-2O95096 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.63□□□□□ -1.99
NKX2-2O95096 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.63□□□□□ -1.99
NKX2-2O95096 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.63□□□□□ -1.99
NKX2-2O95096 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NKX2-2O95096 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
NKX2-2O95096 RNU6-1013P-201ENST00000384180 107 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 RNU2-23P-201ENST00000410545 195 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 RNU6-1245P-201ENST00000411130 106 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 RNU6-293P-201ENST00000411259 106 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 EEF1A1P41-201ENST00000414667 207 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 AC138393.2-201ENST00000414742 246 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 AC006946.1-201ENST00000429106 328 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 SNAP23P1-201ENST00000433229 246 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.63□□□□□ -1.99
NKX2-2O95096 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.63□□□□□ -1.99
NKX2-2O95096 AC124916.1-201ENST00000444020 547 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 RPL7P12-201ENST00000446719 750 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.63□□□□□ -1.99
NKX2-2O95096 snoU13.22-201ENST00000459428 104 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 RNU6-1037P-201ENST00000459571 107 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 RNU6-329P-201ENST00000459618 107 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.63□□□□□ -1.99
NKX2-2O95096 RPL23AP70-201ENST00000483361 460 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 AC046134.1-201ENST00000514454 666 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 SCARNA3-201ENST00000517097 143 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.63□□□□□ -1.99
NKX2-2O95096 HPRT1P3-201ENST00000539521 576 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.63□□□□□ -1.99
NKX2-2O95096 TRAV32-201ENST00000553993 340 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.63□□□□□ -1.99
NKX2-2O95096 AL022345.1-201ENST00000607292 135 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 AC002543.1-201ENST00000299783 1954 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 AC092593.1-201ENST00000515413 1815 ntBASIC2.63□□□□□ -1.99
NKX2-2O95096 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.63□□□□□ -1.99
NKX2-2O95096 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
NKX2-2O95096 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
NKX2-2O95096 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.62□□□□□ -1.99
NKX2-2O95096 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.62□□□□□ -1.99
NKX2-2O95096 Y_RNA.301-201ENST00000364990 103 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 SNORA44-201ENST00000384584 132 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 MIR181A2-201ENST00000384863 110 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 UBA52P6-201ENST00000399822 382 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 U6atac.2-201ENST00000408644 118 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 RNU6-1140P-201ENST00000410517 106 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.62□□□□□ -1.99
NKX2-2O95096 CYCSP48-201ENST00000417124 323 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 AC138623.1-201ENST00000418060 216 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 BX276092.3-201ENST00000424182 230 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 RPL30P4-201ENST00000429309 333 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 AL645568.3-201ENST00000433683 316 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 MTND4LP16-201ENST00000440828 295 ntBASIC2.62□□□□□ -1.99
NKX2-2O95096 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.62□□□□□ -1.99
NKX2-2O95096 RPS3AP12-201ENST00000443616 753 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms